RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 PAQR9Q6ZVX9 377 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 MRPL10Q7Z7H8 261 aaKnown RBP11.55□□□□□ -0.56
GGPS1-201ENST00000282841 HACE1Q8IYU2 909 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 CCDC33Q8N5R6 958 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 RXFP2Q8WXD0 754 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 ZNF518BQ9C0D4 1074 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 NEUROG2Q9H2A3 272 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 PAK6Q9NQU5 681 aaPredicted RBP11.55□□□□□ -0.56
GGPS1-201ENST00000282841 IP6K2Q9UHH9 426 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 GIT1Q9Y2X7 761 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 MRPL42Q9Y6G3 142 aaKnown RBP11.55□□□□□ -0.56
GGPS1-201ENST00000282841 RALGAPA2Q2PPJ7 1873 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 LRRD1A4D1F6 860 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 CCDC151A5D8V7 595 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 ZRANB2O95218 330 aaKnown RBP eCLIP11.55□□□□□ -0.56
GGPS1-201ENST00000282841 KRT1P04264 644 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 PDGFRAP16234 1089 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 LRPAP1P30533 357 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 TLE2Q04725 743 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 HLTFQ14527 1009 aaKnown RBP eCLIP11.55□□□□□ -0.56
GGPS1-201ENST00000282841 ARHGEF6Q15052 776 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 TRIM60Q495X7 471 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 CD300LGQ6UXG3 332 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 TAB3Q8N5C8 712 aaPredicted RBP11.55□□□□□ -0.56
GGPS1-201ENST00000282841 SLC43A3Q8NBI5 491 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 SLC35F5Q8WV83 523 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 TSEN34Q9BSV6 310 aaKnown RBP11.55□□□□□ -0.56
GGPS1-201ENST00000282841 FUT8Q9BYC5 575 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 NGRNQ9NPE2 291 aaKnown RBP11.55□□□□□ -0.56
GGPS1-201ENST00000282841 TMLHEQ9NVH6 421 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 ATP11BQ9Y2G3 1177 aa11.55□□□□□ -0.56
GGPS1-201ENST00000282841 SZT2Q5T011 3432 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 SIGLEC16A6NMB1 481 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 C9IYK1 514 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 SELPP16109 830 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 PNPLA4P41247 253 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 CDK7P50613 346 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 PITX1P78337 314 aaPredicted RBP11.54□□□□□ -0.56
GGPS1-201ENST00000282841 PKDCCQ504Y2 493 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 SND1Q7KZF4 910 aaKnown RBP eCLIP11.54□□□□□ -0.56
GGPS1-201ENST00000282841 GPRIN1Q7Z2K8 1008 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 ZNF598Q86UK7 904 aaKnown RBP11.54□□□□□ -0.56
GGPS1-201ENST00000282841 RHOT1Q8IXI2 618 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 NETO2Q8NC67 525 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 PCED1BQ96HM7 432 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 TMPRSS4Q9NRS4 437 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 SLC38A7Q9NVC3 462 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 RNF14Q9UBS8 474 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 DNM1LO00429 736 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 ZNF623O75123 536 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 ADIGQ0VDE8 80 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 MMRN1Q13201 1228 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 SIX1Q15475 284 aaPredicted RBP11.54□□□□□ -0.56
GGPS1-201ENST00000282841 FAM26DQ5JW98 314 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 CCDC70Q6NSX1 233 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 SLC24A5Q71RS6 500 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 PIGZQ86VD9 579 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 LRRTM3Q86VH5 581 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 CEP57Q86XR8 500 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 ADAM32Q8TC27 787 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 PIK3R5Q8WYR1 880 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 KHSRPQ92945 711 aaKnown RBP eCLIP11.54□□□□□ -0.562e-7■■□□□ 13.3
GGPS1-201ENST00000282841 FAM149B1Q96BN6 582 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 PEBP4Q96S96 227 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 KRT82Q9NSB4 513 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 SAGE1Q9NXZ1 904 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 XIRP2A4UGR9 3374 aa11.54□□□□□ -0.56
GGPS1-201ENST00000282841 CTNNA2P26232 953 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 MIPP30301 263 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 BRD3Q15059 726 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 WDR93Q6P2C0 686 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 CCDC137Q6PK04 289 aaKnown RBP11.53□□□□□ -0.56
GGPS1-201ENST00000282841 GLB1LQ6UWU2 654 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 CCDC105Q8IYK2 499 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 RIN2Q8WYP3 895 aaPredicted RBP11.53□□□□□ -0.56
GGPS1-201ENST00000282841 RTP3Q9BQQ7 232 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 SYT15Q9BQS2 421 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 RGS18Q9NS28 235 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 SNX24Q9Y343 169 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 ENPP3O14638 875 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
GGPS1-201ENST00000282841 DR1Q01658 176 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 GABPB1Q06547 395 aaPredicted RBP11.53□□□□□ -0.56
GGPS1-201ENST00000282841 ODF2Q5BJF6 829 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 SDHAF4Q5VUM1 108 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 OLFML1Q6UWY5 402 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 HFE2Q6ZVN8 426 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 UNC93AQ86WB7 457 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 CRYBG2Q8N1P7 616 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 ANKRD52Q8NB46 1076 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 OR10T2Q8NGX3 314 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 MCRS1Q96EZ8 462 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 HIPK3Q9H422 1215 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 TBC1D13Q9NVG8 400 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 STRIP2Q9ULQ0 834 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 TDRD15B5MCY1 1934 aaKnown RBP11.53□□□□□ -0.56
GGPS1-201ENST00000282841 CES2O00748 559 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 BDNFP23560 247 aa11.53□□□□□ -0.56
GGPS1-201ENST00000282841 GYS2P54840 703 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms