RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 KAT6AQ92794 2004 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 GOLGA6L7A0A1B0GV03 622 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 EXOC1LA0A1B0GW35 172 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 RRN3P2A6NIE6 340 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 CCT8L1PA6NM43 557 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 BTBD19C9JJ37 291 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 PRPF4O43172 522 aaKnown RBP eCLIP7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 SNX3O60493 162 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 CD48P09326 243 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 TSHRP16473 764 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 SMPD1P17405 629 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 GPD1P21695 349 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 HOXA11P31270 313 aaPredicted RBP7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 CTCFP49711 727 aaPredicted RBP7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 GTF2A2P52657 109 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 GDF10P55107 478 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 FASTKD3Q14CZ7 662 aaKnown RBP7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 HIF1AQ16665 826 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 ZC3H12AQ5D1E8 599 aaKnown RBP7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 FAM102AQ5T9C2 384 aaPredicted RBP7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 CYP4F22Q6NT55 531 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 TRNP1Q6NT89 227 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 ARHGEF18Q6ZSZ5 1173 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 APBB1IPQ7Z5R6 666 aaPredicted RBP7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 TRABD2AQ86V40 505 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 LRRC52Q8N7C0 313 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 KCTD6Q8NC69 237 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 CPT1BQ92523 772 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 SGSM3Q96HU1 749 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 HEXIM2Q96MH2 286 aaKnown RBP7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 SLC24A2Q9UI40 661 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 CAPN7Q9Y6W3 813 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 SCN1AP35498 2009 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 ZNF487B1APH4 448 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 DNM1LO00429 736 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 CAPN15O75808 1086 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 GSTA1P08263 222 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 RPL22P35268 128 aaKnown RBP7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 IFNAR2P48551 515 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 DYNLT1P63172 113 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 PLCB3Q01970 1234 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 DGKDQ16760 1214 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 SPRED3Q2MJR0 410 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 FAM47CQ5HY64 1035 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 EFHC2Q5JST6 749 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 IQSEC1Q6DN90 963 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 ALKAL1Q6UXT8 129 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 FAM183BPQ6ZVS7 135 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 GPR142Q7Z601 462 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 STK32AQ8WU08 396 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 TEKT4Q8WW24 435 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 KIF12Q96FN5 646 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 MAGEB18Q96M61 343 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 DHRS4Q9BTZ2 278 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 SLC4A5Q9BY07 1137 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 ABHD16BQ9H3Z7 469 aa7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 SAE1Q9UBE0 346 aaPredicted RBP7.59□□□□□ -1.19
SPARCL1-201ENST00000282470 FAM47DPA6NHR8 397 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 E5RJQ4 531 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 MCF2LO15068 1137 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 GPR32O75388 356 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 VIMP08670 466 aaKnown RBP7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 RDXP35241 583 aaKnown RBP7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 DPYSL3Q14195 570 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 NOMO1Q15155 1222 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 TAF5Q15542 800 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 SLC27A1Q6PCB7 646 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 OLFML1Q6UWY5 402 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 TMEM110Q86TL2 294 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 ZDHHC17Q8IUH5 632 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 SRRM1Q8IYB3 904 aaKnown RBP7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 ZBED8Q8IZ13 594 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 UBA3Q8TBC4 463 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 DYDC1Q8WWB3 177 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 RSAD2Q8WXG1 361 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 BRI3BPQ8WY22 251 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 UPF1Q92900 1129 aaKnown RBP eCLIP7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 RTP4Q96DX8 246 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 PPP1R16BQ96T49 567 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 TINF2Q9BSI4 451 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 SSU72Q9NP77 194 aaKnown RBP7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 CNTN3Q9P232 1028 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 SLC12A4Q9UP95 1085 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 CLUHO75153 1309 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 CCL15-CCL14A0A0B4J2E2 113 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 GLTPD2A6NH11 291 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 TCP11X1B4DZS4 312 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 RASA4BC9J798 803 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 RASA4O43374 803 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 RASSF9O75901 435 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 DNAJC8O75937 253 aaPredicted RBP7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 IFNB1P01574 187 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 STIP1P31948 543 aaKnown RBP7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 PSMC4P43686 418 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 SCTRP47872 440 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 RPL34P49207 117 aaKnown RBP7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 ARL4CP56559 192 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 GPX6P59796 221 aa7.58□□□□□ -1.2
SPARCL1-201ENST00000282470 EIF3EP60228 445 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms