RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 PALLDQ8WX93 1383 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 ZNF804BA4D1E1 1349 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 H7C1D1 291 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 CAPN9O14815 690 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 CEP104O60308 925 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 MMP1P03956 469 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 GJB1P08034 283 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 EPB41P11171 864 aaKnown RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 EPHA5P54756 1037 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 KLHL30Q0D2K2 578 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 SF3A3Q12874 501 aaKnown RBP eCLIP3.09□□□□□ -1.91
HERC4-201ENST00000277817 TUBB2AQ13885 445 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 NBPF9Q3BBW0 867 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 LMBRD2Q68DH5 695 aaPredicted RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 INO80CQ6PI98 192 aaPredicted RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 CPLX4Q7Z7G2 160 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 CCDC50Q8IVM0 306 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 GALNT4Q8N4A0 578 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 GPR161Q8N6U8 529 aaKnown RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 TRIML1Q8N9V2 468 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 LZTS2Q9BRK4 669 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 TUBB2BQ9BVA1 445 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 GOLPH3LQ9H4A5 285 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 SYNCQ9H7C4 482 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 PSTPIP2Q9H939 334 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 MRPL44Q9H9J2 332 aaKnown RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 TOR4AQ9NXH8 423 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 FEM1BQ9UK73 627 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 EPN1Q9Y6I3 576 aaPredicted RBP3.09□□□□□ -1.91
HERC4-201ENST00000277817 TAF6LQ9Y6J9 622 aa3.09□□□□□ -1.91
HERC4-201ENST00000277817 A0A1W2PQM1 296 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 A0A1W2PRG0 241 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 CCDC169A6NNP5 214 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 EFCAB8A8MWE9 144 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 IGF2BP3O00425 579 aaKnown RBP eCLIP3.09□□□□□ -1.92
HERC4-201ENST00000277817 IKBKBO14920 756 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 BUB1O43683 1085 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 SEC31AO94979 1220 aaKnown RBP3.09□□□□□ -1.92
HERC4-201ENST00000277817 GOSR1O95249 250 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 SLFN14P0C7P3 912 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 GRK2P25098 689 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 CASP1P29466 404 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 LSP1P33241 339 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 BTDP43251 543 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 PSMC1P62191 440 aaKnown RBP3.09□□□□□ -1.92
HERC4-201ENST00000277817 TNNC1P63316 161 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 POU4F2Q12837 409 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 SCARF1Q14162 830 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 TARBP2Q15633 366 aaKnown RBP3.09□□□□□ -1.92
HERC4-201ENST00000277817 ASIC2Q16515 512 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 NKG7Q16617 165 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 AOC3Q16853 763 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 MAP1SQ66K74 1059 aaPredicted RBP3.09□□□□□ -1.92
HERC4-201ENST00000277817 CYB5R4Q7L1T6 521 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 USP37Q86T82 979 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 FAM217AQ8IXS0 508 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 GIMAP7Q8NHV1 300 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 RSC1A1Q92681 617 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 FOXRED1Q96CU9 486 aaPredicted RBP3.09□□□□□ -1.92
HERC4-201ENST00000277817 DYNLL2Q96FJ2 89 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 PDLIM2Q96JY6 352 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 FGD4Q96M96 766 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 GSDMAQ96QA5 445 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 SELENOSQ9BQE4 189 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 RNF26Q9BY78 433 aaPredicted RBP3.09□□□□□ -1.92
HERC4-201ENST00000277817 ZNF552Q9H707 407 aaPredicted RBP3.09□□□□□ -1.92
HERC4-201ENST00000277817 ZNF395Q9H8N7 513 aaPredicted RBP3.09□□□□□ -1.92
HERC4-201ENST00000277817 TBC1D14Q9P2M4 693 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 EXTL2Q9UBQ6 330 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 MAN1B1Q9UKM7 699 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 AKT3Q9Y243 479 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 PCDHGB2Q9Y5G2 931 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 SNX5Q9Y5X3 404 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 RALGAPA2Q2PPJ7 1873 aa3.09□□□□□ -1.92
HERC4-201ENST00000277817 LGALS16A8MUM7 142 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 A8MXE2 369 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 B4DLN1 442 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 DDX3XO00571 662 aaKnown RBP eCLIP3.08□□□□□ -1.92
HERC4-201ENST00000277817 SOCS5O75159 536 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 NEBLO76041 1014 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 GCNT3O95395 438 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 OR52Z1P0C646 297 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 RARAP10276 462 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 HARSP12081 509 aaKnown RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 MYCLP12524 364 aaPredicted RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 KRT5P13647 590 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 EZRP15311 586 aaKnown RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 CDC25BP30305 580 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 PRPHP41219 470 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 CTSKP43235 329 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 COPB1P53618 953 aaKnown RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 IFI35P80217 286 aaPredicted RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 GABPB1Q06547 395 aaPredicted RBP3.08□□□□□ -1.92
HERC4-201ENST00000277817 PPP2R5DQ14738 602 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 PPP1R7Q15435 360 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 TXNRD1Q16881 649 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 ZBTB41Q5SVQ8 909 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 SFMBT2Q5VUG0 894 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 HAUS3Q68CZ6 603 aa3.08□□□□□ -1.92
HERC4-201ENST00000277817 KIAA0408Q6ZU52 694 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms