RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 KHSRPQ92945 711 aaKnown RBP eCLIP15.29■□□□□ 0.041e-8■■■■■ 27.1
TRIM23-202ENST00000274327 VWCEQ96DN2 955 aa15.29■□□□□ 0.04
TRIM23-202ENST00000274327 FAM193BQ96PV7 902 aaPredicted RBP15.29■□□□□ 0.04
TRIM23-202ENST00000274327 KRT12Q99456 494 aa15.29■□□□□ 0.04
TRIM23-202ENST00000274327 PKMYT1Q99640 499 aa15.29■□□□□ 0.04
TRIM23-202ENST00000274327 AP1M1Q9BXS5 423 aa15.29■□□□□ 0.04
TRIM23-202ENST00000274327 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
TRIM23-202ENST00000274327 LRFN2Q9ULH4 789 aa15.29■□□□□ 0.04
TRIM23-202ENST00000274327 ATP11BQ9Y2G3 1177 aa15.29■□□□□ 0.04
TRIM23-202ENST00000274327 NLRC5Q86WI3 1866 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 LTBP2Q14767 1821 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 C2CD4BA6NLJ0 364 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 HOXA2O43364 376 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 TCF4P15884 667 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 CLCN6P51797 869 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 ACAP1Q15027 740 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 INTS6LQ5JSJ4 861 aaKnown RBP15.28■□□□□ 0.04
TRIM23-202ENST00000274327 CCDC70Q6NSX1 233 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 TRNP1Q6NT89 227 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 C8orf74Q6P047 294 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 CLEC20AQ6ZU45 233 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 NPAS4Q8IUM7 802 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 ABI1Q8IZP0 508 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 KCTD13Q8WZ19 329 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 RUBCNQ92622 972 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 PLVAPQ9BX97 442 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 NRDE2Q9H7Z3 1164 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 ZNF446Q9NWS9 450 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 DNAJB4Q9UDY4 337 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 NR2E1Q9Y466 385 aa15.28■□□□□ 0.04
TRIM23-202ENST00000274327 DPYSL4O14531 572 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 CLTBP09497 229 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 CAPN2P17655 700 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 GPD1P21695 349 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 RFC2P35250 354 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 OR1G1P47890 313 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 GATMP50440 423 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 ZNF143P52747 638 aaPredicted RBP15.27■□□□□ 0.04
TRIM23-202ENST00000274327 VSNL1P62760 191 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 RNASELQ05823 741 aaKnown RBP15.27■□□□□ 0.04
TRIM23-202ENST00000274327 BRD3Q15059 726 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 LRRC26Q2I0M4 334 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 FAM35AQ86V20 835 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 PIGZQ86VD9 579 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 ZDHHC14Q8IZN3 488 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 EXD1Q8NHP7 514 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 PCED1BQ96HM7 432 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 PAWRQ96IZ0 340 aaKnown RBP15.27■□□□□ 0.04
TRIM23-202ENST00000274327 MED10Q9BTT4 135 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 TMEM39AQ9NV64 488 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 VWA8A3KMH1 1905 aa15.27■□□□□ 0.04
TRIM23-202ENST00000274327 CCDC151A5D8V7 595 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 FSCN2O14926 492 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 LRCH4O75427 683 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 BEST1O76090 585 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 FAM200BP0CF97 657 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 FLT3P36888 993 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 CTCFP49711 727 aaPredicted RBP15.27■□□□□ 0.03
TRIM23-202ENST00000274327 SLC25A11Q02978 314 aaKnown RBP15.27■□□□□ 0.03
TRIM23-202ENST00000274327 SIX1Q15475 284 aaPredicted RBP15.27■□□□□ 0.03
TRIM23-202ENST00000274327 OVOS1Q6IE37 1185 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 CNKSR3Q6P9H4 555 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 ARCQ7LC44 396 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 POLNQ7Z5Q5 900 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 DEFB128Q7Z7B8 93 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 SCUBE3Q8IX30 993 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 KLHL7Q8IXQ5 586 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 HDAC7Q8WUI4 952 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 RXFP2Q8WXD0 754 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 SLITRK6Q9H5Y7 841 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 ASNSD1Q9NWL6 643 aa15.27■□□□□ 0.03
TRIM23-202ENST00000274327 DMGDHQ9UI17 866 aaKnown RBP15.27■□□□□ 0.03
TRIM23-202ENST00000274327 SSR1P43307 286 aaKnown RBP15.26■□□□□ 0.03
TRIM23-202ENST00000274327 SLC8A3P57103 927 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 PPP2R5EQ16537 467 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 SLC26A9Q7LBE3 791 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 THEM5Q8N1Q8 247 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 ZMIZ2Q8NF64 920 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 OR10T2Q8NGX3 314 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 CLEC4CQ8WTT0 213 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 MYLPFQ96A32 169 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 SMOQ99835 787 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 CNPY3Q9BT09 278 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 MRPL9Q9BYD2 267 aaKnown RBP15.26■□□□□ 0.03
TRIM23-202ENST00000274327 UBXN6Q9BZV1 441 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 KRT82Q9NSB4 513 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 CALCOCO1Q9P1Z2 691 aa15.26■□□□□ 0.03
TRIM23-202ENST00000274327 PATJQ8NI35 1801 aa15.25■□□□□ 0.03
TRIM23-202ENST00000274327 GOLGA6L10A0A0M3HER8 536 aa15.25■□□□□ 0.03
TRIM23-202ENST00000274327 BHMG1C9JSJ3 638 aaPredicted RBP15.25■□□□□ 0.03
TRIM23-202ENST00000274327 NRP1O14786 923 aa15.25■□□□□ 0.03
TRIM23-202ENST00000274327 SART1O43290 800 aaKnown RBP15.25■□□□□ 0.03
TRIM23-202ENST00000274327 RAD51CO43502 376 aa15.25■□□□□ 0.03
TRIM23-202ENST00000274327 AP1G2O75843 785 aa15.25■□□□□ 0.03
TRIM23-202ENST00000274327 LCP1P13796 627 aa15.25■□□□□ 0.03
TRIM23-202ENST00000274327 PDGFRAP16234 1089 aa15.25■□□□□ 0.03
TRIM23-202ENST00000274327 MCM3P25205 808 aa15.25■□□□□ 0.03
TRIM23-202ENST00000274327 PCK1P35558 622 aa15.25■□□□□ 0.03
TRIM23-202ENST00000274327 ADCY1Q08828 1119 aa15.25■□□□□ 0.03
TRIM23-202ENST00000274327 TAF5Q15542 800 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms