RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 FOXP3Q9BZS1 431 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 C20orf27Q9GZN8 174 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 PCDH9Q9HC56 1237 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 GABBR1Q9UBS5 961 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 ZNRF3Q9ULT6 936 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 SCINQ9Y6U3 715 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 ZNF541Q9H0D2 1346 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 E2F8A0AVK6 867 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 TMEM191CA6NGB0 347 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 TM9SF1O15321 606 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 TMEM191BP0C7N4 346 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 ACO1P21399 889 aaKnown RBP13.49□□□□□ -0.25
COL8A1-202ENST00000273342 BPIFB4P59827 614 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 CDC16Q13042 620 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 KLHL38Q2WGJ6 581 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 RALGPS1Q5JS13 557 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 ARHGAP22Q7Z5H3 698 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 RFX6Q8HWS3 928 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 TMC2Q8TDI7 906 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 CHURC1Q8WUH1 139 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 GJD4Q96KN9 370 aaPredicted RBP13.49□□□□□ -0.25
COL8A1-202ENST00000273342 NDNQ99608 321 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 APOL6Q9BWW8 343 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 ANGPTL2Q9UKU9 493 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 LOC100653049A0A140TA62 436 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 CXorf49A8MYA2 514 aaPredicted RBP13.49□□□□□ -0.25
COL8A1-202ENST00000273342 I3L4J1 428 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 KRT34O76011 436 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 PGM3O95394 542 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 GSTA2P09210 222 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 IL1R2P27930 398 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 RFC1P35251 1148 aaPredicted RBP13.49□□□□□ -0.25
COL8A1-202ENST00000273342 ZNF200P98182 395 aaPredicted RBP13.49□□□□□ -0.25
COL8A1-202ENST00000273342 C6orf163Q5TEZ5 329 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 TMEM130Q8N3G9 435 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 TMEM143Q96AN5 459 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 CLIC5Q9NZA1 410 aa13.49□□□□□ -0.25
COL8A1-202ENST00000273342 SPECC1L-ADORA2AF8WAN1 911 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 HNRNPCL1O60812 293 aaKnown RBP13.48□□□□□ -0.25
COL8A1-202ENST00000273342 ZMPSTE24O75844 475 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 C6orf222P0C671 652 aaPredicted RBP13.48□□□□□ -0.25
COL8A1-202ENST00000273342 MAPTP10636 758 aaKnown RBP13.48□□□□□ -0.25
COL8A1-202ENST00000273342 PSMA2P25787 234 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 CMPK2Q5EBM0 449 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 NAT8LQ8N9F0 302 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 ZNF398Q8TD17 642 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 TIPINQ9BVW5 301 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 PHACTR1Q9C0D0 580 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 SLC9A2Q9UBY0 812 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 SEPT9Q9UHD8 586 aaPredicted RBP13.48□□□□□ -0.25
COL8A1-202ENST00000273342 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
COL8A1-202ENST00000273342 SNCAIPQ9Y6H5 919 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 IQANK1A0A1B0GTG1 560 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 CCDC160A6NGH7 325 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 CST3P01034 146 aaPredicted RBP13.48□□□□□ -0.25
COL8A1-202ENST00000273342 ETV4P43268 484 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 MMRN1Q13201 1228 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 MTERF2Q49AM1 385 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 MROH9Q5TGP6 573 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 GPAT2Q6NUI2 795 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 SWSAP1Q6NVH7 229 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 RSPH3Q86UC2 560 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 TMPRSS6Q8IU80 811 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 ARHGAP24Q8N264 748 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 JOSD2Q8TAC2 188 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 MASTLQ96GX5 879 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 APOPT1Q96IL0 206 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 DNAJC1Q96KC8 554 aaKnown RBP13.48□□□□□ -0.25
COL8A1-202ENST00000273342 TRAPPC9Q96Q05 1148 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 LYPLA1O75608 230 aaPredicted RBP13.48□□□□□ -0.25
COL8A1-202ENST00000273342 TOM1L1O75674 476 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 CD19P15391 556 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 HOXA10P31260 410 aaPredicted RBP13.48□□□□□ -0.25
COL8A1-202ENST00000273342 AP2B1P63010 937 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 ZACNQ401N2 412 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 LRRC23Q53EV4 343 aaPredicted RBP13.48□□□□□ -0.25
COL8A1-202ENST00000273342 TAS1R3Q7RTX0 852 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 IDI2Q9BXS1 227 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 RBAKQ9NYW8 714 aaPredicted RBP13.48□□□□□ -0.25
COL8A1-202ENST00000273342 PDP2Q9P2J9 529 aa13.48□□□□□ -0.25
COL8A1-202ENST00000273342 RPL26L1Q9UNX3 145 aaKnown RBP13.48□□□□□ -0.25
COL8A1-202ENST00000273342 LRRIQ4A6NIV6 560 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 RGL2O15211 777 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 ZNF862O60290 1169 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 ITGAVP06756 1048 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 RBP3P10745 1247 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 MMP8P22894 467 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 EIF3EP60228 445 aaKnown RBP13.47□□□□□ -0.25
COL8A1-202ENST00000273342 PDE1BQ01064 536 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 ASPHQ12797 758 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 CC2D2BQ6DHV5 1058 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 ENOSF1Q7L5Y1 443 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 NUDCD3Q8IVD9 361 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 PPP1R14CQ8TAE6 165 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 TUBB6Q9BUF5 446 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 TARS2Q9BW92 718 aaKnown RBP13.47□□□□□ -0.25
COL8A1-202ENST00000273342 SPATA16Q9BXB7 569 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 ETNK2Q9NVF9 386 aa13.47□□□□□ -0.25
COL8A1-202ENST00000273342 AGO2Q9UKV8 859 aaKnown RBP13.47□□□□□ -0.25
COL8A1-202ENST00000273342 TMX2Q9Y320 296 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms