RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 RAPGEFL1Q9UHV5 662 aa18.9■□□□□ 0.62
SEC22C-202ENST00000273156 TRIOO75962 3097 aa18.9■□□□□ 0.62
SEC22C-202ENST00000273156 CTAGE9A4FU28 777 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 SYN3O14994 580 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 RFPL2O75678 378 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 MMEP08473 750 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 CD58P19256 250 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 HOXA9P31269 272 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 FMO1Q01740 532 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 RAB33AQ14088 237 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 IFI16Q16666 785 aaKnown RBP18.89■□□□□ 0.62
SEC22C-202ENST00000273156 LRRC52Q8N7C0 313 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 DDX1Q92499 740 aaKnown RBP18.89■□□□□ 0.62
SEC22C-202ENST00000273156 PACSIN1Q9BY11 444 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 PDCL3Q9H2J4 239 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.89■□□□□ 0.62
SEC22C-202ENST00000273156 FBXW11Q9UKB1 542 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 POLIQ9UNA4 740 aa18.89■□□□□ 0.62
SEC22C-202ENST00000273156 TMCO5BA8MYB1 307 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 RTN2O75298 545 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 TMEM253P0C7T8 217 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 GNA15P30679 374 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 PLA2G5P39877 138 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 ZNF132P52740 706 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 GALCP54803 685 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 TNNC1P63316 161 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 SOX4Q06945 474 aaPredicted RBP18.89■□□□□ 0.61
SEC22C-202ENST00000273156 SCARA5Q6ZMJ2 495 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 CTNNBL1Q8WYA6 563 aaPredicted RBP18.89■□□□□ 0.61
SEC22C-202ENST00000273156 NAPGQ99747 312 aaPredicted RBP18.89■□□□□ 0.61
SEC22C-202ENST00000273156 ISCUQ9H1K1 167 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 GOLGA2P5Q9HBQ8 144 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 IGSF9Q9P2J2 1179 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 TUBGCP4Q9UGJ1 667 aa18.89■□□□□ 0.61
SEC22C-202ENST00000273156 CLUHO75153 1309 aa18.88■□□□□ 0.61
SEC22C-202ENST00000273156 A0A0A6YYK5 440 aaPredicted RBP18.88■□□□□ 0.61
SEC22C-202ENST00000273156 ANKRD62A6NC57 917 aa18.88■□□□□ 0.61
SEC22C-202ENST00000273156 H7C4K7 107 aa18.88■□□□□ 0.61
SEC22C-202ENST00000273156 XYLBO75191 536 aa18.88■□□□□ 0.61
SEC22C-202ENST00000273156 URI1O94763 535 aaPredicted RBP18.88■□□□□ 0.61
SEC22C-202ENST00000273156 OR1D2P34982 312 aa18.88■□□□□ 0.61
SEC22C-202ENST00000273156 PPM1LQ5SGD2 360 aa18.88■□□□□ 0.61
SEC22C-202ENST00000273156 TRIM72Q6ZMU5 477 aa18.88■□□□□ 0.61
SEC22C-202ENST00000273156 NXPE3Q969Y0 559 aa18.88■□□□□ 0.61
SEC22C-202ENST00000273156 C18orf25Q96B23 403 aaPredicted RBP18.88■□□□□ 0.61
SEC22C-202ENST00000273156 ZNF707Q96C28 371 aaPredicted RBP18.88■□□□□ 0.61
SEC22C-202ENST00000273156 PCDHB18PQ96TA0 734 aa18.88■□□□□ 0.61
SEC22C-202ENST00000273156 PRRX2Q99811 253 aa18.88■□□□□ 0.61
SEC22C-202ENST00000273156 ZFP37Q9Y6Q3 630 aaPredicted RBP18.88■□□□□ 0.61
SEC22C-202ENST00000273156 MOCS3O95396 460 aa18.87■□□□□ 0.61
SEC22C-202ENST00000273156 FTLP02792 175 aaPredicted RBP18.87■□□□□ 0.61
SEC22C-202ENST00000273156 POU2F2P09086 479 aa18.87■□□□□ 0.61
SEC22C-202ENST00000273156 PAX3P23760 479 aa18.87■□□□□ 0.61
SEC22C-202ENST00000273156 PNPLA4P41247 253 aa18.87■□□□□ 0.61
SEC22C-202ENST00000273156 C9orf57Q5W0N0 161 aa18.87■□□□□ 0.61
SEC22C-202ENST00000273156 CD300LGQ6UXG3 332 aa18.87■□□□□ 0.61
SEC22C-202ENST00000273156 FBXL6Q8N531 539 aa18.87■□□□□ 0.61
SEC22C-202ENST00000273156 C3orf58Q8NDZ4 430 aa18.87■□□□□ 0.61
SEC22C-202ENST00000273156 APPL2Q8NEU8 664 aa18.87■□□□□ 0.61
SEC22C-202ENST00000273156 MMS19Q96T76 1030 aa18.87■□□□□ 0.61
SEC22C-202ENST00000273156 ANO9A1A5B4 782 aa18.86■□□□□ 0.61
SEC22C-202ENST00000273156 THAP12O43422 761 aa18.86■□□□□ 0.61
SEC22C-202ENST00000273156 BUB1O43683 1085 aa18.86■□□□□ 0.61
SEC22C-202ENST00000273156 C8AP07357 584 aa18.86■□□□□ 0.61
SEC22C-202ENST00000273156 TKTP29401 623 aaKnown RBP18.86■□□□□ 0.61
SEC22C-202ENST00000273156 GBP2P32456 591 aaPredicted RBP18.86■□□□□ 0.61
SEC22C-202ENST00000273156 ACAD10Q6JQN1 1059 aa18.86■□□□□ 0.61
SEC22C-202ENST00000273156 PPP1R2P3Q6NXS1 205 aa18.86■□□□□ 0.61
SEC22C-202ENST00000273156 ASIC4Q96FT7 647 aa18.86■□□□□ 0.61
SEC22C-202ENST00000273156 ZNF560Q96MR9 790 aa18.86■□□□□ 0.61
SEC22C-202ENST00000273156 OXCT2Q9BYC2 517 aaPredicted RBP18.86■□□□□ 0.61
SEC22C-202ENST00000273156 TAS2R14Q9NYV8 317 aa18.86■□□□□ 0.61
SEC22C-202ENST00000273156 EPS15L1Q9UBC2 864 aa18.86■□□□□ 0.61
SEC22C-202ENST00000273156 SALL4Q9UJQ4 1053 aa18.86■□□□□ 0.61
SEC22C-202ENST00000273156 CDY1Q9Y6F8 540 aa18.86■□□□□ 0.61
SEC22C-202ENST00000273156 PIRO00625 290 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 FANCGO15287 622 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 NOP2P46087 812 aaKnown RBP18.85■□□□□ 0.61
SEC22C-202ENST00000273156 BRCC3P46736 316 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 TDGQ13569 410 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 TUBB2AQ13885 445 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 CLEC16AQ2KHT3 1053 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 ZNF394Q53GI3 561 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 SLC8B1Q6J4K2 584 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 TMEM130Q8N3G9 435 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 ZNF606Q8WXB4 792 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 SUSD3Q96L08 255 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 CALR3Q96L12 384 aaKnown RBP18.85■□□□□ 0.61
SEC22C-202ENST00000273156 TUBB2BQ9BVA1 445 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 SMYD3Q9H7B4 428 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 MAFFQ9ULX9 164 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 JRKLQ9Y4A0 524 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 PAEPP09466 180 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 ABCB4P21439 1286 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 LRPAP1P30533 357 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 CDH8P55286 799 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 GPC5P78333 572 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 VARS2Q5ST30 1063 aaKnown RBP18.85■□□□□ 0.61
SEC22C-202ENST00000273156 ZNF461Q8TAF7 563 aa18.85■□□□□ 0.61
SEC22C-202ENST00000273156 SDCBP2Q9H190 292 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms