RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.19□□□□□ -0.94
TRIM43-201ENST00000272395 PARVAQ9NVD7 372 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 ADAM22Q9P0K1 906 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 IP6K2Q9UHH9 426 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 NEU2Q9Y3R4 380 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 ACTL7BQ9Y614 415 aa9.19□□□□□ -0.94
TRIM43-201ENST00000272395 SCN5AQ14524 2016 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 SMIM23A6NLE4 172 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 CHUKO15111 745 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 GPR182O15218 404 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 TSPAN1O60635 241 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 CDH16O75309 829 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 LSM8O95777 96 aaKnown RBP9.18□□□□□ -0.94
TRIM43-201ENST00000272395 PRKCBP05771 671 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 PFKMP08237 780 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 VIMP08670 466 aaKnown RBP9.18□□□□□ -0.94
TRIM43-201ENST00000272395 CLTAP09496 248 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 ADCY8P40145 1251 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 MNAT1P51948 309 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 ITGA8P53708 1063 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 COPS2P61201 443 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 DEFB103AP81534 67 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 TAP1Q03518 808 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 MAMLD1Q13495 774 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 SNX1Q13596 522 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 LRRC38Q5VT99 294 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 TDRD10Q5VZ19 366 aaKnown RBP9.18□□□□□ -0.94
TRIM43-201ENST00000272395 PSRC1Q6PGN9 363 aaPredicted RBP9.18□□□□□ -0.94
TRIM43-201ENST00000272395 RTN4RL1Q86UN2 441 aaPredicted RBP9.18□□□□□ -0.94
TRIM43-201ENST00000272395 CDR2LQ86X02 465 aaPredicted RBP9.18□□□□□ -0.94
TRIM43-201ENST00000272395 ZBTB8OSQ8IWT0 167 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 LRRC34Q8IZ02 419 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 CPA5Q8WXQ8 436 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 ARHGEF2Q92974 986 aaKnown RBP9.18□□□□□ -0.94
TRIM43-201ENST00000272395 RBM41Q96IZ5 413 aaKnown RBP9.18□□□□□ -0.94
TRIM43-201ENST00000272395 CGRRF1Q99675 332 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 PRMT1Q99873 361 aaKnown RBP9.18□□□□□ -0.94
TRIM43-201ENST00000272395 ADAM2Q99965 735 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 OSBPL8Q9BZF1 889 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 PRO3102Q9H379 93 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 TMEM134Q9H6X4 195 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 PPCSQ9HAB8 311 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 CHST7Q9NS84 486 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 COLQQ9Y215 455 aaPredicted RBP9.18□□□□□ -0.94
TRIM43-201ENST00000272395 PIN4Q9Y237 131 aaKnown RBP9.18□□□□□ -0.94
TRIM43-201ENST00000272395 SQORQ9Y6N5 450 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 ANK1P16157 1881 aa9.18□□□□□ -0.94
TRIM43-201ENST00000272395 KAT6AQ92794 2004 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 A0A0B4J269 797 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.17□□□□□ -0.94
TRIM43-201ENST00000272395 FAM170AA1A519 330 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 CFAP73A6NFT4 308 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 K7ERI5 159 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 O00370 1275 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 VNN1O95497 513 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 ACSL3O95573 720 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 RALAP11233 206 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 GNA15P30679 374 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 HOXA11P31270 313 aaPredicted RBP9.17□□□□□ -0.94
TRIM43-201ENST00000272395 PTPN7P35236 360 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 SLCO1A2P46721 670 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 WDR5P61964 334 aaKnown RBP9.17□□□□□ -0.94
TRIM43-201ENST00000272395 POU5F1BQ06416 359 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 MCL1Q07820 350 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 IKBKEQ14164 716 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 DSC3Q14574 896 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 PRPF38BQ5VTL8 546 aaKnown RBP9.17□□□□□ -0.94
TRIM43-201ENST00000272395 FAM109BQ6ICB4 259 aaPredicted RBP9.17□□□□□ -0.94
TRIM43-201ENST00000272395 CRELD2Q6UXH1 353 aaPredicted RBP9.17□□□□□ -0.94
TRIM43-201ENST00000272395 FUKQ8N0W3 1084 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 ZCCHC9Q8N567 271 aaKnown RBP9.17□□□□□ -0.94
TRIM43-201ENST00000272395 RBBP8NLQ8NC74 664 aaPredicted RBP9.17□□□□□ -0.94
TRIM43-201ENST00000272395 DYDC1Q8WWB3 177 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 HERVK_113Q902F9 699 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 APBB2Q92870 758 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 TTC25Q96NG3 672 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 DDX23Q9BUQ8 820 aaKnown RBP9.17□□□□□ -0.94
TRIM43-201ENST00000272395 NFKBIZQ9BYH8 718 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 IMPG2Q9BZV3 1241 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 C2orf40Q9H1Z8 148 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 RBAKQ9NYW8 714 aaPredicted RBP9.17□□□□□ -0.94
TRIM43-201ENST00000272395 PCDHB4Q9Y5E5 795 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 EVPLQ92817 2033 aa9.17□□□□□ -0.94
TRIM43-201ENST00000272395 ABHD14A-ACY1A0A1B0GW23 586 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 TMEM120BA0PK00 339 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 GRXCR1A8MXD5 290 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 ENPP3O14638 875 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 SNX3O60493 162 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 SUN1O94901 812 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 TJP3O95049 919 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 OAS1P00973 400 aaKnown RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 CALB1P05937 261 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 ARF4P18085 180 aaPredicted RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 KLRC2P26717 231 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 BMP8BP34820 402 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 ZNF132P52740 706 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 EFNA5P52803 228 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 NOP14P78316 857 aaKnown RBP9.16□□□□□ -0.94
TRIM43-201ENST00000272395 SURF1Q15526 300 aa9.16□□□□□ -0.94
TRIM43-201ENST00000272395 MAPK6Q16659 721 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms