RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 AGO3Q9H9G7 860 aaKnown RBP24.32■■□□□ 1.48
RAB40B-201ENST00000269347 ST3GAL5Q9UNP4 418 aa24.32■■□□□ 1.48
RAB40B-201ENST00000269347 NOVA2Q9UNW9 492 aaKnown RBP24.32■■□□□ 1.48
RAB40B-201ENST00000269347 ADORA2BP29275 332 aa24.31■■□□□ 1.48
RAB40B-201ENST00000269347 PTPN7P35236 360 aa24.31■■□□□ 1.48
RAB40B-201ENST00000269347 MRPS6P82932 125 aaKnown RBP24.31■■□□□ 1.48
RAB40B-201ENST00000269347 BYSLQ13895 437 aaKnown RBP24.31■■□□□ 1.48
RAB40B-201ENST00000269347 KDM7AQ6ZMT4 941 aa24.31■■□□□ 1.48
RAB40B-201ENST00000269347 LIMS2Q7Z4I7 341 aa24.31■■□□□ 1.48
RAB40B-201ENST00000269347 CAPS2Q9BXY5 557 aa24.31■■□□□ 1.48
RAB40B-201ENST00000269347 USP18Q9UMW8 372 aa24.31■■□□□ 1.48
RAB40B-201ENST00000269347 SMIM23A6NLE4 172 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 ADAMTS4O75173 837 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 RARGP13631 454 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 ELNP15502 786 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 ZNF143P52747 638 aaPredicted RBP24.3■■□□□ 1.48
RAB40B-201ENST00000269347 ATP11AP98196 1134 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 CALCOCO2Q13137 446 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 EPS8L3Q8TE67 593 aaKnown RBP24.3■■□□□ 1.48
RAB40B-201ENST00000269347 MTG1Q9BT17 334 aaPredicted RBP24.3■■□□□ 1.48
RAB40B-201ENST00000269347 MIS12Q9H081 205 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 GPATCH2LQ9NWQ4 482 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 DDX56Q9NY93 547 aaKnown RBP24.3■■□□□ 1.48
RAB40B-201ENST00000269347 MTRF1LQ9UGC7 380 aaKnown RBP24.3■■□□□ 1.48
RAB40B-201ENST00000269347 CST8O60676 142 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 TJP3O95049 919 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 MYCNP04198 464 aaPredicted RBP24.3■■□□□ 1.48
RAB40B-201ENST00000269347 ATF2P15336 505 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 PDGFRAP16234 1089 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 PECAM1P16284 738 aaPredicted RBP24.3■■□□□ 1.48
RAB40B-201ENST00000269347 ITIH2P19823 946 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 ATXN1P54253 815 aaKnown RBP24.3■■□□□ 1.48
RAB40B-201ENST00000269347 LILRA4P59901 499 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 GNGT1P63211 74 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 SREBF2Q12772 1141 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 KIAA0319Q5VV43 1072 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 NME8Q8N427 588 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 ALLCQ8N6M5 410 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 KIAA1257Q9ULG3 409 aa24.3■■□□□ 1.48
RAB40B-201ENST00000269347 HMGB1P1B2RPK0 211 aaPredicted RBP24.29■■□□□ 1.48
RAB40B-201ENST00000269347 GAS8O95995 478 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 GPD1P21695 349 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 RABGGTBP53611 331 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 COPS2P61201 443 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 OTUD4Q01804 1114 aaKnown RBP24.29■■□□□ 1.48
RAB40B-201ENST00000269347 P3H1Q32P28 736 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 FAM47CQ5HY64 1035 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 SPDYCQ5MJ68 293 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 APBB1IPQ7Z5R6 666 aaPredicted RBP24.29■■□□□ 1.48
RAB40B-201ENST00000269347 TMEM110Q86TL2 294 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 CMASQ8NFW8 434 aaPredicted RBP24.29■■□□□ 1.48
RAB40B-201ENST00000269347 SLC35B2Q8TB61 432 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 ACTL9Q8TC94 416 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 GRK7Q8WTQ7 553 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 NDRG1Q92597 394 aaKnown RBP24.29■■□□□ 1.48
RAB40B-201ENST00000269347 PPP1R10Q96QC0 940 aaKnown RBP24.29■■□□□ 1.48
RAB40B-201ENST00000269347 AOC2O75106 756 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 ACAT1P24752 427 aaKnown RBP24.29■■□□□ 1.48
RAB40B-201ENST00000269347 EMC10Q5UCC4 262 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 IZUMO3Q5VZ72 239 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 NPNTQ6UXI9 565 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 IPO4Q8TEX9 1081 aaKnown RBP24.29■■□□□ 1.48
RAB40B-201ENST00000269347 UPF3AQ9H1J1 476 aaKnown RBP24.29■■□□□ 1.48
RAB40B-201ENST00000269347 GDAP2Q9NXN4 497 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 ZNF148Q9UQR1 794 aa24.29■■□□□ 1.48
RAB40B-201ENST00000269347 ZNF638Q14966 1978 aaKnown RBP24.28■■□□□ 1.48
RAB40B-201ENST00000269347 ACSL3O95573 720 aa24.28■■□□□ 1.48
RAB40B-201ENST00000269347 GNL1P36915 607 aaPredicted RBP24.28■■□□□ 1.48
RAB40B-201ENST00000269347 SLCO1A2P46721 670 aa24.28■■□□□ 1.48
RAB40B-201ENST00000269347 VCPP55072 806 aaKnown RBP24.28■■□□□ 1.48
RAB40B-201ENST00000269347 GAD2Q05329 585 aa24.28■■□□□ 1.48
RAB40B-201ENST00000269347 CA9Q16790 459 aa24.28■■□□□ 1.48
RAB40B-201ENST00000269347 DENND2CQ68D51 928 aa24.28■■□□□ 1.48
RAB40B-201ENST00000269347 SYDE1Q6ZW31 735 aaPredicted RBP24.28■■□□□ 1.48
RAB40B-201ENST00000269347 C3orf58Q8NDZ4 430 aa24.28■■□□□ 1.48
RAB40B-201ENST00000269347 PAAF1Q9BRP4 392 aa24.28■■□□□ 1.48
RAB40B-201ENST00000269347 SENP6Q9GZR1 1112 aaPredicted RBP24.28■■□□□ 1.48
RAB40B-201ENST00000269347 RNF186Q9NXI6 227 aa24.28■■□□□ 1.48
RAB40B-201ENST00000269347 CWC15Q9P013 229 aaKnown RBP24.28■■□□□ 1.48
RAB40B-201ENST00000269347 ANAPC5Q9UJX4 755 aa24.28■■□□□ 1.48
RAB40B-201ENST00000269347 FOXO6A8MYZ6 492 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 BEST1O76090 585 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 RARBP10826 455 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 MLH1P40692 756 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 ARSEP51690 589 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 FCGRTP55899 365 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 MAGOHP61326 146 aaKnown RBP24.27■■□□□ 1.48
RAB40B-201ENST00000269347 IFI35P80217 286 aaPredicted RBP24.27■■□□□ 1.48
RAB40B-201ENST00000269347 MGAT3Q09327 533 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 ZC3H12AQ5D1E8 599 aaKnown RBP24.27■■□□□ 1.48
RAB40B-201ENST00000269347 ARHGAP17Q68EM7 881 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 DRICH1Q6PGQ1 229 aaPredicted RBP24.27■■□□□ 1.48
RAB40B-201ENST00000269347 PAXIP1Q6ZW49 1069 aaPredicted RBP24.27■■□□□ 1.48
RAB40B-201ENST00000269347 ZNF365Q70YC5 407 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 GSTA5Q7RTV2 222 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 SLC2A14Q8TDB8 520 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 HOMER3Q9NSC5 361 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 TMEM88BA6NKF7 163 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 CLDN5O00501 218 aa24.27■■□□□ 1.48
RAB40B-201ENST00000269347 MGEA5O60502 916 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms