RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TUSC3Q13454 348 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 MAATS1Q7Z4T9 603 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 POLNQ7Z5Q5 900 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 TTC30AQ86WT1 665 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 HERC6Q8IVU3 1022 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 EXD1Q8NHP7 514 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 CCDC26Q8TAB7 109 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 SLC35F5Q8WV83 523 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 SENP8Q96LD8 212 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 ZNF576Q9H609 170 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 MTUS1Q9ULD2 1270 aa16.17■□□□□ 0.18
COPS3-201ENST00000268717 BHMG1C9JSJ3 638 aaPredicted RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 FSCN2O14926 492 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 SART1O43290 800 aaKnown RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 CLCNKBP51801 687 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 AFF1P51825 1210 aaKnown RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 ZNF211Q13398 564 aaPredicted RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 CYP1B1Q16678 543 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 BEND6Q5SZJ8 279 aaPredicted RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 CCNI2Q6ZMN8 369 aaPredicted RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 CPNE8Q86YQ8 564 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 SLC13A5Q86YT5 568 aaPredicted RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 B3GALNT2Q8NCR0 500 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 UBA3Q8TBC4 463 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.16■□□□□ 0.18
COPS3-201ENST00000268717 APBB2Q92870 758 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 HSFY1Q96LI6 401 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 HNRNPABQ99729 332 aaKnown RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 NKX2-4Q9H2Z4 354 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 ELAC1Q9H777 363 aaKnown RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 GDF3Q9NR23 364 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 ZNF446Q9NWS9 450 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 DMGDHQ9UI17 866 aaKnown RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 MYOGP15173 224 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 LMO2P25791 158 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 CHRNA3P32297 505 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 ACADSBP45954 432 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 DHX34Q14147 1143 aaKnown RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 ARCQ7LC44 396 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 OSTM1Q86WC4 334 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 IFT20Q8IY31 132 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 C12orf50Q8NA57 414 aaPredicted RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 RSPH1Q8WYR4 309 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 RBM41Q96IZ5 413 aaKnown RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 AP1M1Q9BXS5 423 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 DPEP3Q9H4B8 488 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 DDX56Q9NY93 547 aaKnown RBP16.16■□□□□ 0.18
COPS3-201ENST00000268717 DSEQ9UL01 958 aa16.16■□□□□ 0.18
COPS3-201ENST00000268717 EYSQ5T1H1 3165 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 RAD51CO43502 376 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 PHF2O75151 1096 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 GJB6O95452 261 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 CYP11A1P05108 521 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 ODC1P11926 461 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 PTPN7P35236 360 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 RFC1P35251 1148 aaPredicted RBP16.15■□□□□ 0.18
COPS3-201ENST00000268717 CETN2P41208 172 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 PLA2G4AP47712 749 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 COPS2P61201 443 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 OGDHQ02218 1023 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 GLB1LQ6UWU2 654 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.15■□□□□ 0.188e-7■■□□□ 12.7
COPS3-201ENST00000268717 TMCO2Q7Z6W1 182 aaPredicted RBP16.15■□□□□ 0.18
COPS3-201ENST00000268717 LINC01599Q8WXQ3 324 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 CDX2Q99626 313 aaPredicted RBP16.15■□□□□ 0.18
COPS3-201ENST00000268717 NCAPGQ9BPX3 1015 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 SLC28A3Q9HAS3 691 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 METTL5Q9NRN9 209 aaKnown RBP16.15■□□□□ 0.18
COPS3-201ENST00000268717 FAM49BQ9NUQ9 324 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 KANSL3Q9P2N6 904 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 TJP2Q9UDY2 1190 aa16.15■□□□□ 0.18
COPS3-201ENST00000268717 TTC3P53804 2025 aa16.14■□□□□ 0.18
COPS3-201ENST00000268717 E5RJQ4 531 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 GOLGA8SH3BPF8 625 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 M0QZQ0 153 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 XPO1O14980 1071 aaKnown RBP16.14■□□□□ 0.17
COPS3-201ENST00000268717 HEXIM1O94992 359 aaKnown RBP16.14■□□□□ 0.17
COPS3-201ENST00000268717 PDGFRBP09619 1106 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 IGFBP6P24592 240 aaPredicted RBP16.14■□□□□ 0.17
COPS3-201ENST00000268717 PSMA2P25787 234 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 PCK1P35558 622 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 FNTAP49354 379 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 SLC8A3P57103 927 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 TAS2R40P59535 323 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 PLCB3Q01970 1234 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 PDE4CQ08493 712 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 GRIN2CQ14957 1233 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 FAM102AQ5T9C2 384 aaPredicted RBP16.14■□□□□ 0.17
COPS3-201ENST00000268717 WSCD1Q658N2 575 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 PMF1Q6P1K2 205 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 DCLRE1AQ6PJP8 1040 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 OLFML1Q6UWY5 402 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 DSTYKQ6XUX3 929 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 RTN4RL1Q86UN2 441 aaPredicted RBP16.14■□□□□ 0.17
COPS3-201ENST00000268717 KLHL7Q8IXQ5 586 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 RCOR2Q8IZ40 523 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 RNF169Q8NCN4 708 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 C3orf58Q8NDZ4 430 aa16.14■□□□□ 0.17
COPS3-201ENST00000268717 HDAC7Q8WUI4 952 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms