RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CCL23P55773 120 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 SIX1Q15475 284 aaPredicted RBP17.21■□□□□ 0.35
TPM1-201ENST00000267996 CYP1B1Q16678 543 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 TRNP1Q6NT89 227 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 FAM171BQ6P995 826 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 POLNQ7Z5Q5 900 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 KLHL7Q8IXQ5 586 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 KCTD13Q8WZ19 329 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 PKMYT1Q99640 499 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 CNPY3Q9BT09 278 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 STIM2Q9P246 746 aa17.21■□□□□ 0.35
TPM1-201ENST00000267996 GOLGA6L10A0A0M3HER8 536 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 F8W810 466 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 HOXA2O43364 376 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 RAD51CO43502 376 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 ZRANB2O95218 330 aaKnown RBP eCLIP17.2■□□□□ 0.34
TPM1-201ENST00000267996 GPD1P21695 349 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 SLC25A11Q02978 314 aaKnown RBP17.2■□□□□ 0.34
TPM1-201ENST00000267996 CLEC20AQ6ZU45 233 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 SLC26A9Q7LBE3 791 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 PIGZQ86VD9 579 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 SCUBE3Q8IX30 993 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 RCOR2Q8IZ40 523 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 PRELID2Q8N945 189 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 HASPINQ8TF76 798 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 RXFP2Q8WXD0 754 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 PCED1BQ96HM7 432 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 PPP1R12CQ9BZL4 782 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 DDX47Q9H0S4 455 aaKnown RBP17.2■□□□□ 0.34
TPM1-201ENST00000267996 TCRBV7S2A1N4TA0A589 114 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 FAM200BP0CF97 657 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 TNFRSF8P28908 595 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 PCK1P35558 622 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 FLT3P36888 993 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 SLC8A3P57103 927 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 MRPS25P82663 173 aaKnown RBP17.2■□□□□ 0.34
TPM1-201ENST00000267996 SLC7A5Q01650 507 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 INTS6LQ5JSJ4 861 aaKnown RBP17.2■□□□□ 0.34
TPM1-201ENST00000267996 CCNI2Q6ZMN8 369 aaPredicted RBP17.2■□□□□ 0.34
TPM1-201ENST00000267996 FAM35AQ86V20 835 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 ABI1Q8IZP0 508 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 VWCEQ96DN2 955 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 UBXN6Q9BZV1 441 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 NRDE2Q9H7Z3 1164 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.2■□□□□ 0.34
TPM1-201ENST00000267996 ASNSD1Q9NWL6 643 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 ZNF446Q9NWS9 450 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 DDX56Q9NY93 547 aaKnown RBP17.2■□□□□ 0.34
TPM1-201ENST00000267996 DNAJB4Q9UDY4 337 aa17.2■□□□□ 0.34
TPM1-201ENST00000267996 PHF2O75151 1096 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 BEST1O76090 585 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 RARAP10276 462 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 PDGFRAP16234 1089 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 SSR1P43307 286 aaKnown RBP17.19■□□□□ 0.34
TPM1-201ENST00000267996 OR1G1P47890 313 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 RNASELQ05823 741 aaKnown RBP17.19■□□□□ 0.34
TPM1-201ENST00000267996 TAF5Q15542 800 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 ATP13A4Q4VNC1 1196 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 TXNRD3NBQ6F5E7 133 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 OVOS1Q6IE37 1185 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 TMCO3Q6UWJ1 677 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 MTERF4Q7Z6M4 381 aaKnown RBP17.19■□□□□ 0.34
TPM1-201ENST00000267996 ADAT2Q7Z6V5 191 aaKnown RBP17.19■□□□□ 0.34
TPM1-201ENST00000267996 NPAS4Q8IUM7 802 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 C12orf50Q8NA57 414 aaPredicted RBP17.19■□□□□ 0.34
TPM1-201ENST00000267996 MAIP1Q8WWC4 291 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 RBM41Q96IZ5 413 aaKnown RBP17.19■□□□□ 0.34
TPM1-201ENST00000267996 FAM193BQ96PV7 902 aaPredicted RBP17.19■□□□□ 0.34
TPM1-201ENST00000267996 HERPUD2Q9BSE4 406 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 MED10Q9BTT4 135 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 GDF3Q9NR23 364 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 MTUS1Q9ULD2 1270 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 LRFN2Q9ULH4 789 aa17.19■□□□□ 0.34
TPM1-201ENST00000267996 MICAL3Q7RTP6 2002 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 ERLIN1O75477 346 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 GLI1P08151 1106 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 KRT7P08729 469 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 CAPN2P17655 700 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 PTPN7P35236 360 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 RFC2P35250 354 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 GATMP50440 423 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 COPS2P61201 443 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 ADCY1Q08828 1119 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 KLF1Q13351 362 aaPredicted RBP17.18■□□□□ 0.34
TPM1-201ENST00000267996 HADHQ16836 314 aaKnown RBP17.18■□□□□ 0.34
TPM1-201ENST00000267996 CCDC14Q49A88 953 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 BEND6Q5SZJ8 279 aaPredicted RBP17.18■□□□□ 0.34
TPM1-201ENST00000267996 THEM5Q8N1Q8 247 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 OR10T2Q8NGX3 314 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 CCDC26Q8TAB7 109 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 SMOQ99835 787 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 OSBPL8Q9BZF1 889 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 C11orf49Q9H6J7 331 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 CSNK1G1Q9HCP0 422 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 ARFGAP3Q9NP61 516 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 KRT82Q9NSB4 513 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 TMEM39AQ9NV64 488 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 ATP11BQ9Y2G3 1177 aa17.18■□□□□ 0.34
TPM1-201ENST00000267996 ZMYND10O75800 440 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 AP1G2O75843 785 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms