RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 PDIA2Q13087 525 aaKnown RBP13.54□□□□□ -0.24
CPSF6-201ENST00000266679 TAF5Q15542 800 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 UBA3Q8TBC4 463 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 PRCCQ92733 491 aaPredicted RBP13.54□□□□□ -0.24
CPSF6-201ENST00000266679 MRRFQ96E11 262 aaKnown RBP13.54□□□□□ -0.24
CPSF6-201ENST00000266679 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.54□□□□□ -0.24
CPSF6-201ENST00000266679 AGAP1Q9UPQ3 857 aa13.54□□□□□ -0.24
CPSF6-201ENST00000266679 SNX3O60493 162 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 SPAG7O75391 227 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 OAS1P00973 400 aaKnown RBP13.53□□□□□ -0.24
CPSF6-201ENST00000266679 ARF4P18085 180 aaPredicted RBP13.53□□□□□ -0.24
CPSF6-201ENST00000266679 GAD2Q05329 585 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 TMEM132DQ14C87 1099 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 FAM187BQ17R55 369 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 FAM102AQ5T9C2 384 aaPredicted RBP13.53□□□□□ -0.24
CPSF6-201ENST00000266679 NUGGCQ68CJ6 796 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 BBS12Q6ZW61 710 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 CENPUQ71F23 418 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 FASTKD5Q7L8L6 764 aaKnown RBP13.53□□□□□ -0.24
CPSF6-201ENST00000266679 KCTD6Q8NC69 237 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 CXorf38Q8TB03 319 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 FNIP1Q8TF40 1166 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 HPDLQ96IR7 371 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 HEXIM2Q96MH2 286 aaKnown RBP13.53□□□□□ -0.24
CPSF6-201ENST00000266679 TGS1Q96RS0 853 aaKnown RBP13.53□□□□□ -0.24
CPSF6-201ENST00000266679 ADPGKQ9BRR6 497 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 NFKBIZQ9BYH8 718 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 ABCF3Q9NUQ8 709 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 WDR35Q9P2L0 1181 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 SHOC2Q9UQ13 582 aa13.53□□□□□ -0.24
CPSF6-201ENST00000266679 MYCP01106 439 aaPredicted RBP13.52□□□□□ -0.24
CPSF6-201ENST00000266679 CTGFP29279 349 aa13.52□□□□□ -0.24
CPSF6-201ENST00000266679 MIPP30301 263 aa13.52□□□□□ -0.24
CPSF6-201ENST00000266679 MYO1EQ12965 1108 aa13.52□□□□□ -0.24
CPSF6-201ENST00000266679 ZNF268Q14587 947 aaPredicted RBP13.52□□□□□ -0.24
CPSF6-201ENST00000266679 SLC10A6Q3KNW5 377 aa13.52□□□□□ -0.24
CPSF6-201ENST00000266679 ANKRD22Q5VYY1 191 aa13.52□□□□□ -0.24
CPSF6-201ENST00000266679 RIBC1Q8N443 379 aaPredicted RBP13.52□□□□□ -0.24
CPSF6-201ENST00000266679 AFG1LQ8WV93 481 aa13.52□□□□□ -0.24
CPSF6-201ENST00000266679 NLRP7Q8WX94 980 aa13.52□□□□□ -0.24
CPSF6-201ENST00000266679 MAML1Q92585 1016 aa13.52□□□□□ -0.24
CPSF6-201ENST00000266679 GGT7Q9UJ14 662 aa13.52□□□□□ -0.24
CPSF6-201ENST00000266679 P4HA1P13674 534 aa13.52□□□□□ -0.25
CPSF6-201ENST00000266679 CYP3A5P20815 502 aa13.52□□□□□ -0.25
CPSF6-201ENST00000266679 ATICP31939 592 aa13.52□□□□□ -0.25
CPSF6-201ENST00000266679 GSCP56915 257 aaPredicted RBP13.52□□□□□ -0.25
CPSF6-201ENST00000266679 LAMC2Q13753 1193 aa13.52□□□□□ -0.25
CPSF6-201ENST00000266679 FAM133BQ5BKY9 247 aaKnown RBP13.52□□□□□ -0.25
CPSF6-201ENST00000266679 ARHGEF18Q6ZSZ5 1173 aa13.52□□□□□ -0.25
CPSF6-201ENST00000266679 TRPM8Q7Z2W7 1104 aa13.52□□□□□ -0.25
CPSF6-201ENST00000266679 LINC01465Q8N7H1 131 aa13.52□□□□□ -0.25
CPSF6-201ENST00000266679 RSAD2Q8WXG1 361 aa13.52□□□□□ -0.25
CPSF6-201ENST00000266679 PAIP2Q9BPZ3 127 aaKnown RBP13.52□□□□□ -0.25
CPSF6-201ENST00000266679 KIF9Q9HAQ2 790 aa13.52□□□□□ -0.25
CPSF6-201ENST00000266679 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.52□□□□□ -0.25
CPSF6-201ENST00000266679 USP15Q9Y4E8 981 aaPredicted RBP13.52□□□□□ -0.25
CPSF6-201ENST00000266679 PTCH2Q9Y6C5 1203 aa13.52□□□□□ -0.25
CPSF6-201ENST00000266679 TRIP11Q15643 1979 aa13.52□□□□□ -0.25
CPSF6-201ENST00000266679 VDRP11473 427 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 NDST1P52848 882 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 HIF1AQ16665 826 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 RAB6CQ53S08 254 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 TAPT1Q6NXT6 567 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 TRABD2AQ86V40 505 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 UNC45BQ8IWX7 931 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 TTC13Q8NBP0 860 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 MCRS1Q96EZ8 462 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 PEBP4Q96S96 227 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 CALN1Q9BXU9 219 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 RAB6CQ9H0N0 254 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 CYP3A43Q9HB55 503 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 USP18Q9UMW8 372 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 FARP1Q9Y4F1 1045 aaPredicted RBP13.51□□□□□ -0.25
CPSF6-201ENST00000266679 ACTL7BQ9Y614 415 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 DOCK3Q8IZD9 2030 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 NDC80O14777 642 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 ALOX15BO15296 676 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 RASSF9O75901 435 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 RNF8O76064 485 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 TRUB2O95900 331 aaKnown RBP13.51□□□□□ -0.25
CPSF6-201ENST00000266679 RPL22P35268 128 aaKnown RBP13.51□□□□□ -0.25
CPSF6-201ENST00000266679 ADCYAP1R1P41586 468 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 GPD2P43304 727 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 EIF3EP60228 445 aaKnown RBP13.51□□□□□ -0.25
CPSF6-201ENST00000266679 MMRN1Q13201 1228 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 MTM1Q13496 603 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 EFTUD2Q15029 972 aaKnown RBP eCLIP13.51□□□□□ -0.257e-7■■■■□ 20
CPSF6-201ENST00000266679 TAZQ16635 292 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 CCDC142Q17RM4 750 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 SH3PXD2AQ5TCZ1 1133 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 OR6B2Q6IFH4 312 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 NPNTQ6UXI9 565 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 PPP1R21Q6ZMI0 780 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 ANKRD23Q86SG2 305 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 PPIL6Q8IXY8 311 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 CPT1BQ92523 772 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 MAGEB18Q96M61 343 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 ADAM33Q9BZ11 813 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 TRABDQ9H4I3 376 aa13.51□□□□□ -0.25
CPSF6-201ENST00000266679 ASB7Q9H672 318 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms