RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 BBS5Q8N3I7 341 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 GSTCDQ8NEC7 633 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 ZFRQ96KR1 1074 aaKnown RBP13.71□□□□□ -0.21
NUP54-201ENST00000264883 PHF12Q96QT6 1004 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 ST6GALNAC4Q9H4F1 302 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 BCAS3Q9H6U6 928 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 AVENQ9NQS1 362 aaPredicted RBP13.71□□□□□ -0.21
NUP54-201ENST00000264883 SLC17A7Q9P2U7 560 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 ADAMTS6Q9UKP5 1117 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 LZTS1Q9Y250 596 aa13.71□□□□□ -0.21
NUP54-201ENST00000264883 TRMUO75648 421 aaKnown RBP13.71□□□□□ -0.22
NUP54-201ENST00000264883 SGPL1O95470 568 aa13.71□□□□□ -0.22
NUP54-201ENST00000264883 BMP3P12645 472 aa13.71□□□□□ -0.22
NUP54-201ENST00000264883 CPA3P15088 417 aa13.71□□□□□ -0.22
NUP54-201ENST00000264883 IKQ13123 557 aaPredicted RBP13.71□□□□□ -0.22
NUP54-201ENST00000264883 LPIN1Q14693 890 aa13.71□□□□□ -0.22
NUP54-201ENST00000264883 TATDN1Q6P1N9 297 aa13.71□□□□□ -0.22
NUP54-201ENST00000264883 RNF111Q6ZNA4 994 aa13.71□□□□□ -0.22
NUP54-201ENST00000264883 PASD1Q8IV76 773 aa13.71□□□□□ -0.22
NUP54-201ENST00000264883 ICA1LQ8NDH6 482 aa13.71□□□□□ -0.22
NUP54-201ENST00000264883 PRMT6Q96LA8 375 aaPredicted RBP13.71□□□□□ -0.22
NUP54-201ENST00000264883 HERPUD2Q9BSE4 406 aa13.71□□□□□ -0.22
NUP54-201ENST00000264883 MRPS26Q9BYN8 205 aaKnown RBP13.71□□□□□ -0.22
NUP54-201ENST00000264883 TAGLN3Q9UI15 199 aa13.71□□□□□ -0.22
NUP54-201ENST00000264883 FAF1Q9UNN5 650 aaPredicted RBP13.71□□□□□ -0.22
NUP54-201ENST00000264883 FAM237BA0A1B0GVD1 139 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 TPD52L2O43399 206 aaKnown RBP13.7□□□□□ -0.22
NUP54-201ENST00000264883 HIRAP54198 1017 aaPredicted RBP13.7□□□□□ -0.22
NUP54-201ENST00000264883 CACNB3P54284 484 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 ENPEPQ07075 957 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 PPP3CAQ08209 521 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 FASTKD3Q14CZ7 662 aaKnown RBP13.7□□□□□ -0.22
NUP54-201ENST00000264883 PRKD1Q15139 912 aaPredicted RBP13.7□□□□□ -0.22
NUP54-201ENST00000264883 EFHC1Q5JVL4 640 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 NSMFQ6X4W1 530 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 PATL1Q86TB9 770 aaKnown RBP13.7□□□□□ -0.22
NUP54-201ENST00000264883 NIM1KQ8IY84 436 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 BTBD9Q96Q07 612 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 WDR18Q9BV38 432 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 TEKT3Q9BXF9 490 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 IKZF4Q9H2S9 585 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 UNC45AQ9H3U1 944 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 C17orf75Q9HAS0 396 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 PPARGC1AQ9UBK2 798 aaKnown RBP13.7□□□□□ -0.22
NUP54-201ENST00000264883 ITGB1BP2Q9UKP3 347 aa13.7□□□□□ -0.22
NUP54-201ENST00000264883 COL2A1P02458 1487 aaPredicted RBP13.7□□□□□ -0.22
NUP54-201ENST00000264883 KANSL1LA0AUZ9 987 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 NDUFB10O96000 172 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 SLC5A2P31639 672 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 PDIA2Q13087 525 aaKnown RBP13.69□□□□□ -0.22
NUP54-201ENST00000264883 TRIP10Q15642 601 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 Q6ZNX1 250 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 ENOSF1Q7L5Y1 443 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 SH3BP5LQ7L8J4 393 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 GSTA5Q7RTV2 222 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 TMC7Q7Z402 723 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 CROCCP3Q8IVE0 287 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 CYP2W1Q8TAV3 490 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 SLC26A7Q8TE54 656 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 RIT2Q99578 217 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 FAM118BQ9BPY3 351 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 ATRNL1Q5VV63 1379 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 GOLGA8RI6L899 631 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 ADCY3O60266 1144 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 ATP6V1B1P15313 513 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 CYP11B1P15538 503 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 MAPK4P31152 587 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 MYH11P35749 1972 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 GCLMP48507 274 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 CXCL9Q07325 125 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 HIC1Q14526 733 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 CCNG2Q16589 344 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 B3GNT9Q6UX72 402 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 USP37Q86T82 979 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 MARVELD2Q8N4S9 558 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 MPHOSPH6Q99547 160 aaKnown RBP13.69□□□□□ -0.22
NUP54-201ENST00000264883 SENP6Q9GZR1 1112 aaPredicted RBP13.69□□□□□ -0.22
NUP54-201ENST00000264883 ACP6Q9NPH0 428 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 LTBP3Q9NS15 1303 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 PLK2Q9NYY3 685 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 THEGQ9P2T0 379 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 COQ4Q9Y3A0 265 aa13.69□□□□□ -0.22
NUP54-201ENST00000264883 DDTLA6NHG4 134 aaPredicted RBP13.68□□□□□ -0.22
NUP54-201ENST00000264883 SPDYE2BA6NHP3 402 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 ARHGAP42A6NI28 874 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 WDR46O15213 610 aaKnown RBP13.68□□□□□ -0.22
NUP54-201ENST00000264883 CYP26A1O43174 497 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 CHMP2AO43633 222 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 DKC1O60832 514 aaKnown RBP eCLIP13.68□□□□□ -0.22
NUP54-201ENST00000264883 POLR2MP0CAP2 368 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 SPDYE6P0CI01 402 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 HOXA13P31271 388 aaPredicted RBP13.68□□□□□ -0.22
NUP54-201ENST00000264883 NCKAP1LP55160 1127 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 DLG4P78352 724 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 PDE1BQ01064 536 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 CEP55Q53EZ4 464 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 ISLR2Q6UXK2 745 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 PRPF39Q86UA1 669 aaKnown RBP13.68□□□□□ -0.22
NUP54-201ENST00000264883 ZNF677Q86XU0 584 aa13.68□□□□□ -0.22
NUP54-201ENST00000264883 BANPQ8N9N5 519 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms