RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ALDH7A1P49419 539 aaKnown RBP14.55□□□□□ -0.08
CDH3-201ENST00000264012 HIC1Q14526 733 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 THEMIS2Q5TEJ8 643 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 TRPM8Q7Z2W7 1104 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 ZBTB45Q96K62 511 aaPredicted RBP14.55□□□□□ -0.08
CDH3-201ENST00000264012 TLR10Q9BXR5 811 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 MYO5BQ9ULV0 1848 aa14.55□□□□□ -0.08
CDH3-201ENST00000264012 TISP43B9A030 160 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 RAD23BP54727 409 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 TBCCQ15814 346 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 ZBTB41Q5SVQ8 909 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 DENND5BQ6ZUT9 1274 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 ABHD16BQ9H3Z7 469 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 SIK3Q9Y2K2 1263 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 RPS6KL1Q9Y6S9 549 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 ZNF197O14709 1029 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 SERPINB4P48594 390 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 IL17AQ16552 155 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 LINC00523Q86TU6 105 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 PBXIP1Q96AQ6 731 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 SH3KBP1Q96B97 665 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 ASB7Q9H672 318 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 SLC39A10Q9ULF5 831 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 BARX2Q9UMQ3 279 aaPredicted RBP14.54□□□□□ -0.08
CDH3-201ENST00000264012 AP4E1Q9UPM8 1137 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 SH3BP1Q9Y3L3 701 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 ANKRD63C9JTQ0 380 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 C2CD2LO14523 706 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 FGRP09769 529 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 ARHGDIAP52565 204 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 CORO7P57737 925 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 VGLL4Q14135 290 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 RABGAP1LQ5R372 815 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 CCDC60Q8IWA6 550 aaPredicted RBP14.54□□□□□ -0.08
CDH3-201ENST00000264012 ATP6V0D2Q8N8Y2 350 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 FBXO36Q8NEA4 188 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 ACTL9Q8TC94 416 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 RPRD1AQ96P16 312 aaPredicted RBP14.54□□□□□ -0.08
CDH3-201ENST00000264012 ANKZF1Q9H8Y5 726 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 LATS2Q9NRM7 1088 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 PTENP60484 403 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 KDM7AQ6ZMT4 941 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 MIB1Q86YT6 1006 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 CCDC33Q8N5R6 958 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 PCSK9Q8NBP7 692 aaKnown RBP14.54□□□□□ -0.08
CDH3-201ENST00000264012 E2F7Q96AV8 911 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 DNAJC19Q96DA6 116 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 MANSC1Q9H8J5 431 aa14.54□□□□□ -0.08
CDH3-201ENST00000264012 MYO1DO94832 1006 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 AARSP49588 968 aaKnown RBP eCLIP14.53□□□□□ -0.08
CDH3-201ENST00000264012 BST2Q10589 180 aaKnown RBP14.53□□□□□ -0.08
CDH3-201ENST00000264012 CDCA5Q96FF9 252 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 WDR18Q9BV38 432 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 CDC42EP4Q9H3Q1 356 aaKnown RBP14.53□□□□□ -0.08
CDH3-201ENST00000264012 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.53□□□□□ -0.08
CDH3-201ENST00000264012 UBR1Q8IWV7 1749 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 HMOX2P30519 316 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 LHX1P48742 406 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 NDST1P52848 882 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 ST8SIA6P61647 398 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 DNAJC3Q13217 504 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 KIRREL3Q8IZU9 778 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 ARMC2Q8NEN0 867 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 DNAJB3Q8WWF6 145 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 TMEM169Q96HH4 297 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 PCDHB8Q9UN66 801 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 MRC1P22897 1456 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 FBXO21O94952 628 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 RPLP2P05387 115 aaKnown RBP14.53□□□□□ -0.08
CDH3-201ENST00000264012 TGM2P21980 687 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 UBA1P22314 1058 aaKnown RBP14.53□□□□□ -0.08
CDH3-201ENST00000264012 MAP3K7CLP57077 242 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 FUT2Q10981 343 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 RNF168Q8IYW5 571 aaPredicted RBP14.53□□□□□ -0.08
CDH3-201ENST00000264012 NRBF2Q96F24 287 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 TSPAN16Q9UKR8 245 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 HIST1H2AGP0C0S8 130 aaPredicted RBP14.53□□□□□ -0.08
CDH3-201ENST00000264012 HIST1H2ADP20671 130 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 ERFP50548 548 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 POLE2P56282 527 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 ERVK-9P63128 1117 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 TMEM259Q4ZIN3 620 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 LRRC8EQ6NSJ5 796 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 CATSPERGQ6ZRH7 1159 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 LRRC55Q6ZSA7 311 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 DDX53Q86TM3 631 aaKnown RBP14.53□□□□□ -0.08
CDH3-201ENST00000264012 HIST1H2AHQ96KK5 128 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 HIST1H2AJQ99878 128 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 H2AFJQ9BTM1 129 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 CASS4Q9NQ75 786 aa14.53□□□□□ -0.08
CDH3-201ENST00000264012 MTO1Q9Y2Z2 717 aaKnown RBP14.53□□□□□ -0.08
CDH3-201ENST00000264012 AKT1P31749 480 aa14.52□□□□□ -0.08
CDH3-201ENST00000264012 PTK6Q13882 451 aa14.52□□□□□ -0.08
CDH3-201ENST00000264012 SLC27A1Q6PCB7 646 aa14.52□□□□□ -0.08
CDH3-201ENST00000264012 CYP39A1Q9NYL5 469 aa14.52□□□□□ -0.08
CDH3-201ENST00000264012 ANGPT2O15123 496 aa14.52□□□□□ -0.08
CDH3-201ENST00000264012 PJA2O43164 708 aa14.52□□□□□ -0.08
CDH3-201ENST00000264012 PYGLP06737 847 aa14.52□□□□□ -0.08
CDH3-201ENST00000264012 CHI3L2Q15782 390 aa14.52□□□□□ -0.08
CDH3-201ENST00000264012 NUDT18Q6ZVK8 323 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms