RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CFHP08603 1231 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 VDRP11473 427 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 MYL4P12829 197 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 RFX1P22670 979 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 PBX1P40424 430 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 CCR2P41597 374 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 JAM2P57087 298 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 USP46P62068 366 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 RPL10AP62906 217 aaKnown RBP19.42■□□□□ 0.7
SDF4-201ENST00000263741 VEPH1Q14D04 833 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 PABPC1LQ4VXU2 614 aaKnown RBP19.42■□□□□ 0.7
SDF4-201ENST00000263741 ARHGAP17Q68EM7 881 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 GET4Q7L5D6 327 aaPredicted RBP19.42■□□□□ 0.7
SDF4-201ENST00000263741 GPRIN1Q7Z2K8 1008 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 PSMG2Q969U7 264 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 TCEAL4Q96EI5 215 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 ZNF512Q96ME7 567 aaPredicted RBP19.42■□□□□ 0.7
SDF4-201ENST00000263741 RIPOR3Q96MK2 946 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 STK33Q9BYT3 514 aa19.42■□□□□ 0.7
SDF4-201ENST00000263741 SLC38A8A6NNN8 435 aa19.41■□□□□ 0.7
SDF4-201ENST00000263741 THAP12O43422 761 aa19.41■□□□□ 0.7
SDF4-201ENST00000263741 GFPT2O94808 682 aa19.41■□□□□ 0.7
SDF4-201ENST00000263741 PAPLNO95428 1278 aa19.41■□□□□ 0.7
SDF4-201ENST00000263741 ANXA13P27216 316 aa19.41■□□□□ 0.7
SDF4-201ENST00000263741 TMC8Q8IU68 726 aa19.41■□□□□ 0.7
SDF4-201ENST00000263741 FAM71AQ8IYT1 594 aa19.41■□□□□ 0.7
SDF4-201ENST00000263741 ITFG1Q8TB96 612 aa19.41■□□□□ 0.7
SDF4-201ENST00000263741 SPAG5Q96R06 1193 aa19.41■□□□□ 0.7
SDF4-201ENST00000263741 DNAI2Q9GZS0 605 aa19.41■□□□□ 0.7
SDF4-201ENST00000263741 TRIM66O15016 1216 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 MICAL2O94851 1124 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 NPR3P17342 541 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 RTL10Q7L3V2 364 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 CACNA2D4Q7Z3S7 1137 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 LRRC3Q9BY71 257 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 ASAH2Q9NR71 780 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.4■□□□□ 0.7
SDF4-201ENST00000263741 M0QYV0 167 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 HMGA1P17096 107 aaKnown RBP19.4■□□□□ 0.7
SDF4-201ENST00000263741 PTPN2P17706 415 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 MTHFRP42898 656 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 MRPS5P82675 430 aaKnown RBP19.4■□□□□ 0.7
SDF4-201ENST00000263741 ARID5AQ03989 594 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 SMAD2Q15796 467 aaKnown RBP19.4■□□□□ 0.7
SDF4-201ENST00000263741 TAF12Q16514 161 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.4■□□□□ 0.76e-7■■■■■ 34.3
SDF4-201ENST00000263741 ST13P5Q8NFI4 369 aaPredicted RBP19.4■□□□□ 0.7
SDF4-201ENST00000263741 SCAMP5Q8TAC9 235 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 C8orf48Q96LL4 319 aa19.4■□□□□ 0.7
SDF4-201ENST00000263741 WDR6Q9NNW5 1121 aaKnown RBP19.4■□□□□ 0.7
SDF4-201ENST00000263741 GOLGA6L6A8MZA4 724 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 PDE4CQ08493 712 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 PASD1Q8IV76 773 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 DUSP16Q9BY84 665 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 TTYH3Q9C0H2 523 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 CSNK1G1Q9HCP0 422 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 MYO10Q9HD67 2058 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 POU2F2P09086 479 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 CEBPBP17676 345 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 SLC5A3P53794 718 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 STXBP5Q5T5C0 1151 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 TAF3Q5VWG9 929 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 DENND1BQ6P3S1 775 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 DENND5BQ6ZUT9 1274 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 PDZD4Q76G19 769 aaPredicted RBP19.39■□□□□ 0.69
SDF4-201ENST00000263741 ITIH5Q86UX2 942 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 ZNF606Q8WXB4 792 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 BAP1Q92560 729 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 ASB2Q96Q27 587 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 HESX1Q9UBX0 185 aa19.39■□□□□ 0.69
SDF4-201ENST00000263741 UQCRHLA0A096LP55 91 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 A0A1W2PRU2 124 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 HHLA1C9JL84 531 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 PIK3R2O00459 728 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 UQCRHP07919 91 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 FSHRP23945 695 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 GABRR2P28476 465 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 SOX5P35711 763 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 AAK1Q2M2I8 961 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 LCLAT1Q6UWP7 414 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 GAREM2Q75VX8 874 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 ANKRD52Q8NB46 1076 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 ATXN2LQ8WWM7 1075 aaKnown RBP19.38■□□□□ 0.69
SDF4-201ENST00000263741 SECISBP2LQ93073 1101 aaKnown RBP19.38■□□□□ 0.69
SDF4-201ENST00000263741 SPATA17Q96L03 361 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 TRIM5Q9C035 493 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 IL21Q9HBE4 155 aa19.38■□□□□ 0.69
SDF4-201ENST00000263741 MRPS23Q9Y3D9 190 aaKnown RBP19.38■□□□□ 0.69
SDF4-201ENST00000263741 NUP210Q8TEM1 1887 aaPredicted RBP19.38■□□□□ 0.69
SDF4-201ENST00000263741 HELZP42694 1942 aaKnown RBP19.38■□□□□ 0.69
SDF4-201ENST00000263741 CBFA2T2O43439 604 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 CSH1P0DML2 217 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 CSH2P0DML3 217 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 RGS7P49802 495 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 BCAT1P54687 386 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 CYP4F8P98187 520 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 PTK2Q05397 1052 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 CNGA2Q16280 664 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 PRSS36Q5K4E3 855 aa19.37■□□□□ 0.69
SDF4-201ENST00000263741 E4F1Q66K89 784 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms