RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 FAM200BP0CF97 657 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 LCP1P13796 627 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 NPR3P17342 541 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 MMP8P22894 467 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 RGS19P49795 217 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 NDUFV1P49821 464 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 BCAT1P54687 386 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 GPC5P78333 572 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 ROR1Q01973 937 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 KIF5AQ12840 1032 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 GPRIN1Q7Z2K8 1008 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 TMC7Q7Z402 723 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 PIGZQ86VD9 579 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 DCP1BQ8IZD4 617 aaKnown RBP10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 SLC35G2Q8TBE7 412 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 SPPL3Q8TCT6 385 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 GPR152Q8TDT2 470 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 CLEC4CQ8WTT0 213 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 CTNNBL1Q8WYA6 563 aaPredicted RBP10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 PIWIL1Q96J94 861 aaKnown RBP10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 BTBD6Q96KE9 485 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 TRIM7Q9C029 511 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 MIS12Q9H081 205 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 ZBP1Q9H171 429 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 OSGEPQ9NPF4 335 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 KCND1Q9NSA2 647 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 CNOT8Q9UFF9 292 aaKnown RBP10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 COG5Q9UP83 839 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 LAMA3Q16787 3333 aa10.28□□□□□ -0.76
SNRNP40-201ENST00000263694 MTMR11A4FU01 709 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 F8VP50 259 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 LILRB3O75022 631 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 CXCL14O95715 111 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 CYP1A2P05177 515 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 SPATA31D3P0C874 917 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 NOP2P46087 812 aaKnown RBP10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 NAP1L1P55209 391 aaKnown RBP10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 DUSP4Q13115 394 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 GPR17Q13304 367 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 PTPN14Q15678 1187 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 DDR2Q16832 855 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 PLPP4Q5VZY2 271 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 SPATA31D4Q6ZUB0 917 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 XYLT1Q86Y38 959 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 SCN4BQ8IWT1 228 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 SCUBE3Q8IX30 993 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 POF1BQ8WVV4 589 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 C18orf8Q96DM3 657 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 SMARCD1Q96GM5 515 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 C16orf45Q96MC5 204 aaPredicted RBP10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 TCF25Q9BQ70 676 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 SLC4A5Q9BY07 1137 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 GOLPH3Q9H4A6 298 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 SYNCQ9H7C4 482 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 LUC7LQ9NQ29 371 aaKnown RBP10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 MRPL17Q9NRX2 175 aaKnown RBP10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 CTTNBP2NLQ9P2B4 639 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 CHD7Q9P2D1 2997 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 INTUQ9ULD6 942 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 PCDHB5Q9Y5E4 795 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 BACE2Q9Y5Z0 518 aa10.27□□□□□ -0.76
SNRNP40-201ENST00000263694 EPOPA6NHQ4 379 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 HIDE1A8MVS5 230 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 HHLA1C9JL84 531 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 XPO1O14980 1071 aaKnown RBP10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 TEX28O15482 410 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 KRT86O43790 486 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 GRAP2O75791 330 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 SEC24AO95486 1093 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 CNPP09543 421 aaKnown RBP10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 SETSIPP0DME0 302 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 CTSAP10619 480 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 BMP8BP34820 402 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 IRS1P35568 1242 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 GRIK1P39086 918 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 ADCY1Q08828 1119 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 CAMK1Q14012 370 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 TAF5Q15542 800 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 MAPRE1Q15691 268 aaKnown RBP10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 PTPROQ16827 1216 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 OR6B2Q6IFH4 312 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 SLC8B1Q6J4K2 584 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 C4orf50Q6ZRC1 276 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 FAM183BPQ6ZVS7 135 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 CPNE8Q86YQ8 564 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 TDHQ8IZJ6 230 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 TGS1Q96RS0 853 aaKnown RBP10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 NUP85Q9BW27 656 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 ENTPD7Q9NQZ7 604 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 MSRAQ9UJ68 235 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 CAPN6Q9Y6Q1 641 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 NCANO14594 1321 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 TCRBV5S1A1TA0A578 114 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 C5orf67F2Z3F1 127 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 RFXAPO00287 272 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 PAPSS1O43252 624 aaPredicted RBP10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 CCP110O43303 1012 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 CALB1P05937 261 aa10.26□□□□□ -0.77
SNRNP40-201ENST00000263694 PLA2G4AP47712 749 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms