RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 DNAI2Q9GZS0 605 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 TLR9Q9NR96 1032 aa29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 TRMT1Q9NXH9 659 aaKnown RBP29.04■■■□□ 2.24
SMARCD3-201ENST00000262188 MTMR11A4FU01 709 aa29.03■■■□□ 2.24
SMARCD3-201ENST00000262188 ATMINO43313 823 aaPredicted RBP29.03■■■□□ 2.24
SMARCD3-201ENST00000262188 ATP8B1O43520 1251 aa29.03■■■□□ 2.24
SMARCD3-201ENST00000262188 RB1P06400 928 aa29.03■■■□□ 2.24
SMARCD3-201ENST00000262188 SDHAF4Q5VUM1 108 aa29.03■■■□□ 2.24
SMARCD3-201ENST00000262188 ACAD10Q6JQN1 1059 aa29.03■■■□□ 2.24
SMARCD3-201ENST00000262188 ZMIZ2Q8NF64 920 aa29.03■■■□□ 2.24
SMARCD3-201ENST00000262188 CPXM1Q96SM3 734 aa29.03■■■□□ 2.24
SMARCD3-201ENST00000262188 C11orf70Q9BRQ4 267 aa29.03■■■□□ 2.24
SMARCD3-201ENST00000262188 LHX5Q9H2C1 402 aa29.03■■■□□ 2.24
SMARCD3-201ENST00000262188 H3BNC9 293 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 MYO1CO00159 1063 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 GABBR2O75899 941 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 SPATA31D3P0C874 917 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 FAM200BP0CF97 657 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 MAGEA1P43355 309 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 GPR17Q13304 367 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 STILQ15468 1287 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 PTPN20Q4JDL3 420 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 MMS22LQ6ZRQ5 1243 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 SPATA31D4Q6ZUB0 917 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 TMEM35BQ8NCS4 154 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 MNS1Q8NEH6 495 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 DUSP16Q9BY84 665 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 ST7Q9NRC1 585 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 TRIM10Q9UDY6 481 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 LZTS1Q9Y250 596 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 TRANK1O15050 2925 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 TRIOBPQ9H2D6 2365 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 BCAT1P54687 386 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 CENPCQ03188 943 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 ADCY1Q08828 1119 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 CYP4A22Q5TCH4 519 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 SMYD5Q6GMV2 418 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 TRIM72Q6ZMU5 477 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 SLC35F5Q8WV83 523 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 PPP2R2CQ9Y2T4 447 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 PTPRDP23468 1912 aa29.02■■■□□ 2.24
SMARCD3-201ENST00000262188 NPR3P17342 541 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 ANXA13P27216 316 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 CDH5P33151 784 aaPredicted RBP29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 NSFP46459 744 aaKnown RBP29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 GALCP54803 685 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 BST2Q10589 180 aaKnown RBP29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 PDCLQ13371 301 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 SAMD11Q96NU1 681 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 LACRTQ9GZZ8 138 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 ISCUQ9H1K1 167 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 RTN2O75298 545 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 LSM8O95777 96 aaKnown RBP29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 DUSP4Q13115 394 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 MAPRE1Q15691 268 aaKnown RBP29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 C4orf50Q6ZRC1 276 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 GPRIN1Q7Z2K8 1008 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 SCN4BQ8IWT1 228 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 GPR152Q8TDT2 470 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 SMARCD1Q96GM5 515 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 THAP2Q9H0W7 228 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 PCDHB5Q9Y5E4 795 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 DUSP10Q9Y6W6 482 aa29.01■■■□□ 2.23
SMARCD3-201ENST00000262188 MYO9BQ13459 2157 aa29■■■□□ 2.23
SMARCD3-201ENST00000262188 C2orf71A6NGG8 1288 aa29■■■□□ 2.23
SMARCD3-201ENST00000262188 F8VP50 259 aa29■■■□□ 2.23
SMARCD3-201ENST00000262188 SMAD3P84022 425 aaKnown RBP29■■■□□ 2.23
SMARCD3-201ENST00000262188 DDR2Q16832 855 aa29■■■□□ 2.23
SMARCD3-201ENST00000262188 PIGZQ86VD9 579 aa29■■■□□ 2.23
SMARCD3-201ENST00000262188 ARHGEF26Q96DR7 871 aa29■■■□□ 2.23
SMARCD3-201ENST00000262188 IPO7O95373 1038 aaKnown RBP28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 SEC24AO95486 1093 aa28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 ERBB2P04626 1255 aa28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 GZMAP12544 262 aa28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 PTP4A2Q12974 167 aa28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 NFE2Q16621 373 aaPredicted RBP28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 MON1BQ7L1V2 547 aa28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 CNPY4Q8N129 248 aa28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 MRPL43Q8N983 215 aaKnown RBP28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 SEPT5Q99719 369 aaPredicted RBP28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 RXFP1Q9HBX9 757 aa28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 KIF2AO00139 706 aaPredicted RBP28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 GRIK1P39086 918 aa28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 KIAA1328Q86T90 577 aa28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 MCOLN2Q8IZK6 566 aa28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 PPP1R13BQ96KQ4 1090 aa28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 KLHL5Q96PQ7 755 aa28.99■■■□□ 2.23
SMARCD3-201ENST00000262188 E5RJQ4 531 aa28.98■■■□□ 2.23
SMARCD3-201ENST00000262188 GJB6O95452 261 aa28.98■■■□□ 2.23
SMARCD3-201ENST00000262188 CCDC175P0C221 793 aa28.98■■■□□ 2.23
SMARCD3-201ENST00000262188 UBE3AQ05086 875 aa28.98■■■□□ 2.23
SMARCD3-201ENST00000262188 SMC1AQ14683 1233 aaKnown RBP28.98■■■□□ 2.23
SMARCD3-201ENST00000262188 FBXO38Q6PIJ6 1188 aa28.98■■■□□ 2.23
SMARCD3-201ENST00000262188 ERICH1Q86X53 443 aa28.98■■■□□ 2.23
SMARCD3-201ENST00000262188 ADAM22Q9P0K1 906 aa28.98■■■□□ 2.23
SMARCD3-201ENST00000262188 SZT2Q5T011 3432 aa28.98■■■□□ 2.23
SMARCD3-201ENST00000262188 FSCN2O14926 492 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 H2AFXP16104 143 aaPredicted RBP28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 MMP8P22894 467 aa28.97■■■□□ 2.23
SMARCD3-201ENST00000262188 MGAT5BQ3V5L5 792 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms