RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 RFX1P22670 979 aa13.59□□□□□ -0.23
SNX1-201ENST00000261889 GTF2A2P52657 109 aa13.59□□□□□ -0.23
SNX1-201ENST00000261889 AQP5P55064 265 aa13.59□□□□□ -0.23
SNX1-201ENST00000261889 ARHGAP8P85298 464 aa13.59□□□□□ -0.23
SNX1-201ENST00000261889 CLUL1Q15846 466 aa13.59□□□□□ -0.23
SNX1-201ENST00000261889 TCHHL1Q5QJ38 904 aaPredicted RBP13.59□□□□□ -0.23
SNX1-201ENST00000261889 CCDC62Q6P9F0 684 aa13.59□□□□□ -0.23
SNX1-201ENST00000261889 MAP4K3Q8IVH8 894 aa13.59□□□□□ -0.23
SNX1-201ENST00000261889 ABRAQ8N0Z2 381 aa13.59□□□□□ -0.23
SNX1-201ENST00000261889 PIWIL1Q96J94 861 aaKnown RBP13.59□□□□□ -0.23
SNX1-201ENST00000261889 IQCGQ9H095 443 aaKnown RBP13.59□□□□□ -0.23
SNX1-201ENST00000261889 IRAK4Q9NWZ3 460 aa13.59□□□□□ -0.23
SNX1-201ENST00000261889 AGO2Q9UKV8 859 aaKnown RBP13.59□□□□□ -0.23
SNX1-201ENST00000261889 TCRBV9S1A1TA0A576 114 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 TOM1L1O75674 476 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 TJP3O95049 919 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 CYP1A1P04798 512 aaPredicted RBP13.58□□□□□ -0.23
SNX1-201ENST00000261889 SRGAP2CP0DJJ0 459 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 CCNFP41002 786 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 PHKA2P46019 1235 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 CHI3L2Q15782 390 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 C1orf146Q5VVC0 180 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 B3GNT9Q6UX72 402 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 RAPH1Q70E73 1250 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 RNF148Q8N7C7 305 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 PPP1R13LQ8WUF5 828 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 MSTO1Q9BUK6 570 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 TMX2Q9Y320 296 aa13.58□□□□□ -0.23
SNX1-201ENST00000261889 SCN4AP35499 1836 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 COL2A1P02458 1487 aaPredicted RBP13.58□□□□□ -0.24
SNX1-201ENST00000261889 EGFRP00533 1210 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 ACO1P21399 889 aaKnown RBP13.58□□□□□ -0.24
SNX1-201ENST00000261889 VHLP40337 213 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 NT5C2P49902 561 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 RAB27AP51159 221 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 VCPP55072 806 aaKnown RBP13.58□□□□□ -0.24
SNX1-201ENST00000261889 CENPCQ03188 943 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 ACVR2BQ13705 512 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 HSF5Q4G112 596 aaPredicted RBP13.58□□□□□ -0.24
SNX1-201ENST00000261889 TRMT10BQ6PF06 316 aaKnown RBP13.58□□□□□ -0.24
SNX1-201ENST00000261889 RIPOR1Q6ZS17 1223 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 ARFGAP1Q8N6T3 406 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 TEX9Q8N6V9 391 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 CHURC1Q8WUH1 139 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 ZBED3Q96IU2 234 aaPredicted RBP13.58□□□□□ -0.24
SNX1-201ENST00000261889 NSL1Q96IY1 281 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 DCLRE1BQ9H816 532 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 STOML1Q9UBI4 398 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 hCG_1818297A0A087WSY0 165 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 SNUPNO95149 360 aaKnown RBP13.58□□□□□ -0.24
SNX1-201ENST00000261889 PGM3O95394 542 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 INHBAP08476 426 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 MAPTP10636 758 aaKnown RBP13.58□□□□□ -0.24
SNX1-201ENST00000261889 CAP2P40123 477 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 BTKQ06187 659 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 BST1Q10588 318 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 NCOA4Q13772 614 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 NFIL3Q16649 462 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 TMEM132AQ24JP5 1023 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 C15orf59Q2T9L4 293 aaPredicted RBP13.58□□□□□ -0.24
SNX1-201ENST00000261889 CES3Q6UWW8 571 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 RGS9BPQ6ZS82 235 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 DENND5BQ6ZUT9 1274 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 UBA3Q8TBC4 463 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 CLEC4DQ8WXI8 215 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 FGD4Q96M96 766 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 SLC9A2Q9UBY0 812 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 HMGXB4Q9UGU5 601 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 SCOCQ9UIL1 159 aa13.58□□□□□ -0.24
SNX1-201ENST00000261889 BPTFQ12830 3046 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 A6NJR5 290 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 ATP2A1O14983 1001 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 CCDC22O60826 627 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 OPHN1O60890 802 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 RBP3P10745 1247 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 PRKCEQ02156 737 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 PARP6Q2NL67 630 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 DENND1BQ6P3S1 775 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 ZNF276Q8N554 614 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 EXD1Q8NHP7 514 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 SLCO2A1Q92959 643 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 GRAMD1AQ96CP6 724 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 SH3GL3Q99963 347 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 RANBP17Q9H2T7 1088 aaKnown RBP13.57□□□□□ -0.24
SNX1-201ENST00000261889 MAN1C1Q9NR34 630 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 ZNF277Q9NRM2 450 aaPredicted RBP13.57□□□□□ -0.24
SNX1-201ENST00000261889 CYTH4Q9UIA0 394 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 C2CD2LO14523 706 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 APRTP07741 180 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 KCNA4P22459 653 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 HOXA7P31268 230 aaPredicted RBP13.57□□□□□ -0.24
SNX1-201ENST00000261889 RANBP1P43487 201 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 NCKAP1LP55160 1127 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 PGM5Q15124 567 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 KATNAL2Q8IYT4 538 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 SPATA18Q8TC71 538 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 DCAKDQ8WVC6 231 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 PGBD4Q96DM1 585 aa13.57□□□□□ -0.24
SNX1-201ENST00000261889 OXNAD1Q96HP4 312 aaPredicted RBP13.57□□□□□ -0.24
SNX1-201ENST00000261889 RIT2Q99578 217 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms