RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 A0A0G2JND7 137 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 FAM205CA6NFA0 338 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 LMNAP02545 664 aaKnown RBP14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 PTGER2P43116 358 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 MRNIPQ6NTE8 343 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 SPACA7Q96KW9 195 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 AGPAT3Q9NRZ7 376 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 ADGRB2O60241 1585 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 CENPAP49450 140 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 APLP1P51693 650 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 PEX6Q13608 980 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 PRAMEF19Q5SWL8 479 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 TRIM65Q6PJ69 517 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 TMEM86AQ8N2M4 240 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 TMEM60Q9H2L4 133 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 PLAAQ9Y263 795 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 SOAT2O75908 522 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 ENDOD1O94919 500 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 USP41Q3LFD5 358 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 TMEM176AQ96HP8 235 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 CHAMP1Q96JM3 812 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 FAR2Q96K12 515 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 RRN3Q9NYV6 651 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 SCHIP1Q9P0W5 487 aaPredicted RBP14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 SMAPO00193 183 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 GUCY2CP25092 1073 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 NBPF20Q3BBV1 942 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 POTEAQ6S8J7 498 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 MIR1-1HGQ9H1L0 117 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 CAPN11Q9UMQ6 739 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 DTNAQ9Y4J8 743 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 ZNF839A8K0R7 811 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 KRT16P08779 473 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 PAX3P23760 479 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 FLT3LGP49771 235 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 THOP1P52888 689 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 VPS37AQ8NEZ2 397 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 OR9Q1Q8NGQ5 310 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 PGLYRP2Q96PD5 576 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 CORO1BQ9BR76 489 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 DMAP1Q9NPF5 467 aaPredicted RBP14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 KRCC1Q9NPI7 259 aaPredicted RBP14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 ZC3H7BQ9UGR2 993 aaKnown RBP14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 UCHL3P15374 230 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 LAG3P18627 525 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 CCR1P32246 355 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 NOMO2Q5JPE7 1267 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 MYO1HQ8N1T3 1032 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 SERPINB11Q96P15 392 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 FAM32AQ9Y421 112 aaKnown RBP14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 CHUKO15111 745 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 RPN2P04844 631 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 CXCL8P10145 99 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 SPRP35270 261 aaPredicted RBP14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 ORC1Q13415 861 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 KRT80Q6KB66 452 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 ANKMY2Q8IV38 441 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 BCAS4Q8TDM0 211 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 CXorf40AQ8TE69 158 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 PNMA5Q96PV4 448 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 MRIQ9BWK5 157 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 GOLPH3Q9H4A6 298 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 TLE6Q9H808 572 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 KCNQ5Q9NR82 932 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 NDOR1Q9UHB4 597 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 FBXL5Q9UKA1 691 aa14.1□□□□□ -0.15
PDGFRB-201ENST00000261799 GOLGA8TH3BQL2 631 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 TNNI3P19429 210 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 GUCA1AP43080 201 aaPredicted RBP14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 SH3BGRP55822 239 aaPredicted RBP14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 ESRRGP62508 458 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 CNTN1Q12860 1018 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 PCBP1Q15365 356 aaKnown RBP eCLIP14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 EMBQ6PCB8 327 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 MTSS1LQ765P7 747 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 ADSSL1Q8N142 457 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 TAF1DQ9H5J8 278 aaPredicted RBP14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 RBAK-RBAKDNI3L0D1 243 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 CLNS1AP54105 237 aaKnown RBP14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 ANTXR2P58335 489 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 LRRC74AQ0VAA2 488 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 PDK2Q15119 407 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 MMGT1Q8N4V1 131 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 PITPNM3Q9BZ71 974 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 RAD18Q9NS91 495 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 RIC8BQ9NVN3 520 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 APPL1Q9UKG1 709 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 TIMM13Q9Y5L4 95 aaPredicted RBP14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 ANGPT2O15123 496 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 VPS26AO75436 327 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 APOBEC3HQ6NTF7 200 aaKnown RBP14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 SPATA18Q8TC71 538 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 MCOLN3Q8TDD5 553 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 CLPBQ9H078 707 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 RPS6KB2Q9UBS0 482 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 CD2BP2O95400 341 aaKnown RBP14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 MLNP12872 115 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 C3orf67Q6ZVT6 689 aa14.09□□□□□ -0.15
PDGFRB-201ENST00000261799 RFWD2Q8NHY2 731 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms