RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CFAP99D6REC4 459 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 FOXN3O00409 490 aaPredicted RBP12.55□□□□□ -0.4
COL8A1-201ENST00000261037 VWA5AO00534 786 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 STX7O15400 261 aaKnown RBP12.55□□□□□ -0.4
COL8A1-201ENST00000261037 ZNF286BP0CG31 522 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 MLNP12872 115 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 CDC16Q13042 620 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 PGS1Q32NB8 556 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 OLFML2BQ68BL8 750 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 CENPPQ6IPU0 288 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 OTOAQ7RTW8 1153 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 ARHGAP18Q8N392 663 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 C10orf53Q8N6V4 93 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 RIN3Q8TB24 985 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 SLC25A13Q9UJS0 675 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 GPR75-ASB3A0A0A6YYF3 556 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 TTLL13PA6NNM8 815 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 CYB561D2O14569 222 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 ERVK-24P63145 666 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 SLC44A2Q8IWA5 706 aaPredicted RBP12.55□□□□□ -0.4
COL8A1-201ENST00000261037 ANKS1AQ92625 1134 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 ERLEC1Q96DZ1 483 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 APOL2Q9BQE5 337 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 ZSWIM1Q9BR11 485 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 VIPAS39Q9H9C1 493 aa12.55□□□□□ -0.4
COL8A1-201ENST00000261037 F5H5T6 163 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 TPST1O60507 370 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 ZC3H11AO75152 810 aaKnown RBP eCLIP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 RNF180Q86T96 592 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 ADGRF2Q8IZF7 708 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 PALMDQ9NP74 551 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 UBQLN1Q9UMX0 589 aaKnown RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 KRT87PA6NCN2 255 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 CSDE1O75534 798 aaKnown RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 KRT8P05787 483 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 PNPLA4P41247 253 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 MAPRE1Q15691 268 aaKnown RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 EZH2Q15910 746 aaKnown RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 SLC13A5Q86YT5 568 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 FBXO32Q969P5 355 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 NSL1Q96IY1 281 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 HNRNPCP07910 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 GYS1P13807 737 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 CYP11B2P19099 503 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 S100A5P33763 92 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 CHI3L1P36222 383 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 SNRPFP62306 86 aaKnown RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 ARID3BQ8IVW6 561 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 ANKRD13AQ8IZ07 590 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 DUSP10Q9Y6W6 482 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 CD163L1Q9NR16 1453 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 C16orf96A6NNT2 1141 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 PRR23D1E9PI22 279 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 TRIM66O15016 1216 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 SPAG6O75602 509 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 PRR23D2P0DMB1 279 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 TFE3P19532 575 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 SLC11A2P49281 568 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 SKOR1P84550 965 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 HIST2H2ACQ16777 129 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 HIST2H2AA3Q6FI13 130 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 SRLQ86TD4 932 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 CCDC60Q8IWA6 550 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 FAM172AQ8WUF8 416 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 PAWRQ96IZ0 340 aaKnown RBP12.54□□□□□ -0.4
COL8A1-201ENST00000261037 PPP1R2P1Q96PQ5 205 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 CBWD1Q9BRT8 395 aa12.54□□□□□ -0.4
COL8A1-201ENST00000261037 PSTPIP1O43586 416 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 SOAT2O75908 522 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 SUPT7LO94864 414 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 EFEMP1Q12805 493 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 POTEAQ6S8J7 498 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 RINLQ6ZS11 566 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 PRUNE1Q86TP1 453 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 LINC00523Q86TU6 105 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 DIS3LQ8TF46 1054 aaKnown RBP12.53□□□□□ -0.4
COL8A1-201ENST00000261037 FICDQ9BVA6 458 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 ROPN1BQ9BZX4 212 aaPredicted RBP12.53□□□□□ -0.4
COL8A1-201ENST00000261037 ROPN1Q9HAT0 212 aaPredicted RBP12.53□□□□□ -0.4
COL8A1-201ENST00000261037 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.53□□□□□ -0.4
COL8A1-201ENST00000261037 CDY2AQ9Y6F7 541 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 CDY1Q9Y6F8 540 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 PXDNLA1KZ92 1463 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 P4HA2O15460 535 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
COL8A1-201ENST00000261037 ANXA9O76027 345 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 STAG3L1P0CL83 205 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 RFX5P48382 616 aaPredicted RBP12.53□□□□□ -0.4
COL8A1-201ENST00000261037 GEMP55040 296 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 CLEC17AQ6ZS10 378 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 LRRC34Q8IZ02 419 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 GTF3C2Q8WUA4 911 aaPredicted RBP12.53□□□□□ -0.4
COL8A1-201ENST00000261037 PRMT6Q96LA8 375 aaPredicted RBP12.53□□□□□ -0.4
COL8A1-201ENST00000261037 ECSITQ9BQ95 431 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 MKNK1Q9BUB5 465 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 THUMPD3Q9BV44 507 aaKnown RBP12.53□□□□□ -0.4
COL8A1-201ENST00000261037 POLLQ9UGP5 575 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 RPS6KL1Q9Y6S9 549 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 C2orf81A6NN90 581 aa12.53□□□□□ -0.4
COL8A1-201ENST00000261037 ALOX15P16050 662 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms