RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 GALNTL6Q49A17 601 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 WASHC2DQ5SRD0 308 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 ZNF772Q68DY9 489 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CCDC81Q6ZN84 652 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 ZNF467Q7Z7K2 595 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 P3H2Q8IVL5 708 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 LRRC39Q96DD0 335 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CINPQ9BW66 212 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 TRMT6Q9UJA5 497 aaKnown RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 POLIQ9UNA4 740 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 LRCH1Q9Y2L9 728 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 RGS5O15539 181 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 GAS2O43903 313 aaKnown RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 GLRA3O75311 464 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SOAT1P35610 550 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 KLK7P49862 253 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CHRNB3Q05901 458 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 TWF1Q12792 350 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 ARHGEF7Q14155 803 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 RASA2Q15283 850 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 EFHC1Q5JVL4 640 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CYP4Z2PQ8N1L4 340 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 KYQ8NBH2 561 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 IGDCC4Q8TDY8 1250 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 ANKS1AQ92625 1134 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 PNKPQ96T60 521 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 KATNAL1Q9BW62 490 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 RPAP3Q9H6T3 665 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 TRPC7Q9HCX4 862 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CACNA2D2Q9NY47 1150 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 NFKBIL1Q9UBC1 381 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 PTPRMP28827 1452 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SMIM31A0A1B0GVY4 71 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 GUCY1A2P33402 732 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 MTFR1Q15390 333 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 KLHDC7AQ5VTJ3 777 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 NOTUMQ6P988 496 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 FLCNQ8NFG4 579 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 EPS8L3Q8TE67 593 aaKnown RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 MTERF3Q96E29 417 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 BDH2Q9BUT1 245 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 OSBPL10Q9BXB5 764 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SCUBE2Q9NQ36 999 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 PNPLA6Q8IY17 1366 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SCN2AQ99250 2005 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 C2orf81A6NN90 581 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 ATMINO43313 823 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 BCL10O95999 233 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 MLH1P40692 756 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 MAGEA10P43363 369 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CAPZA2P47755 286 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 PRKAA2P54646 552 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 FOXO4P98177 505 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 COX10Q12887 443 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 EPHA7Q15375 998 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 ACAD10Q6JQN1 1059 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 DDX53Q86TM3 631 aaKnown RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 KRT73Q86Y46 540 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SLC7A5P2Q9GIP4 190 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 NIF3L1Q9GZT8 377 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 RAVER2Q9HCJ3 691 aaKnown RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CD209Q9NNX6 404 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 CNGB3Q9NQW8 809 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 MOSPD1Q9UJG1 213 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 TUBE1Q9UJT0 475 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 RICTORQ6R327 1708 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 MYMKA6NI61 221 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 TRIM49D1C9J1S8 452 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 MPOP05164 745 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 ODC1P11926 461 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 PDGFRAP16234 1089 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 PRIM2P49643 509 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 ANGPT1Q15389 498 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 COBLL1Q53SF7 1204 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SPDYCQ5MJ68 293 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 MROH9Q5TGP6 573 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SUSD4Q5VX71 490 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 PLEKHA7Q6IQ23 1121 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 HDDC2Q7Z4H3 204 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 TTC30AQ86WT1 665 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 RNF149Q8NC42 400 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 IPMKQ8NFU5 416 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 HPDLQ96IR7 371 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 C1orf50Q9BV19 199 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SPRTNQ9H040 489 aaPredicted RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SERHL2Q9H4I8 314 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SERHLQ9NQF3 203 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 VTI1BQ9UEU0 232 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 DDX20Q9UHI6 824 aaKnown RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 TBX20Q9UMR3 447 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SF3B1O75533 1304 aaKnown RBP eCLIP4.97□□□□□ -1.612e-6■■■■■ 113.6
RC3H1-201ENST00000258349 ZNF543Q08ER8 600 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 SMAD1Q15797 465 aaKnown RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 INAQ16352 499 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 C16orf86Q6ZW13 317 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 OR8H2Q8N162 312 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 RTL3Q8N8U3 475 aaKnown RBP4.97□□□□□ -1.61
RC3H1-201ENST00000258349 AGAP3Q96P47 875 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 OLFM1Q99784 485 aa4.97□□□□□ -1.61
RC3H1-201ENST00000258349 KLHL31Q9H511 634 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms