RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 PKD2L2Q9NZM6 624 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 SPATA31A6Q5VVP1 1343 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 HORMAD1Q86X24 394 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 F5H5T6 163 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 MAN1A2O60476 641 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 TSPAN3O60637 253 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 SLC16A1P53985 500 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 HDAC4P56524 1084 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 CENPCQ03188 943 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 EXOSC4Q9NPD3 245 aaKnown RBP19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 ZNF711Q9Y462 761 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 CFAP99D6REC4 459 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 SLC11A2P49281 568 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 PTK6Q13882 451 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 CACUL1Q86Y37 369 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 PGLYRP2Q96PD5 576 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 KCNQ5Q9NR82 932 aa19.38■□□□□ 0.69
SMARCC1-201ENST00000254480 MT-CO1P00395 513 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 PNPLA4P41247 253 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 NUDT2P50583 147 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 CDC16Q13042 620 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 CELF6Q96J87 481 aaKnown RBP19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 ASCC2Q9H1I8 757 aaPredicted RBP19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 ZNF556Q9HAH1 456 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 TRMT6Q9UJA5 497 aaKnown RBP19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 EPHX2P34913 555 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 TATDN2Q93075 761 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 SGSM3Q96HU1 749 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 COLEC11Q9BWP8 271 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 PIF1Q9H611 641 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 RNF112Q9ULX5 631 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 AGRPO00253 132 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 ARHGAP15Q53QZ3 475 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 DDI1Q8WTU0 396 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 SLC12A8A0AV02 714 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 GPR182O15218 404 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 NBPF20Q3BBV1 942 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 TRIM48Q8IWZ4 208 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 KCTD17Q8N5Z5 321 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 ATP11BQ9Y2G3 1177 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 AKAP3O75969 853 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 TFE3P19532 575 aaPredicted RBP19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 MAP1SQ66K74 1059 aaPredicted RBP19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 C16orf89Q6UX73 402 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 YME1L1Q96TA2 773 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 RERGLQ9H628 205 aa19.37■□□□□ 0.69
SMARCC1-201ENST00000254480 HSPA1AP0DMV8 641 aaKnown RBP19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 HSPA1BP0DMV9 641 aaKnown RBP19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 ITGB6P18564 788 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 NAMPTP43490 491 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 SLFN11Q7Z7L1 901 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 MAGEB10Q96LZ2 347 aaPredicted RBP19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 ZDHHC15Q96MV8 337 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 GTF3C4Q9UKN8 822 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 IGF2BP3O00425 579 aaKnown RBP eCLIP19.36■□□□□ 0.695e-9■■■□□ 15
SMARCC1-201ENST00000254480 ARMC6Q6NXE6 501 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 PCYOX1LQ8NBM8 494 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 THUMPD3Q9BV44 507 aaKnown RBP19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 P4HA2O15460 535 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 LZTS3O60299 673 aaPredicted RBP19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 TRIM60Q495X7 471 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 DNAJB3Q8WWF6 145 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 SCUBE2Q9NQ36 999 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 ZBTB22O15209 634 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 SREBF1P36956 1147 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 GCLCP48506 637 aaPredicted RBP19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 DEPDC1Q5TB30 811 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 CCDC81Q6ZN84 652 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 TUBGCP3Q96CW5 907 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 PLEKHA8Q96JA3 519 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 DDX28Q9NUL7 540 aaKnown RBP19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 PSD3Q9NYI0 1048 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 TRIM16O95361 564 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 LRRC34Q8IZ02 419 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 AGO4Q9HCK5 861 aaKnown RBP19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 CISHQ9NSE2 258 aa19.36■□□□□ 0.69
SMARCC1-201ENST00000254480 CBX4O00257 560 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 TBC1D4O60343 1298 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 CXCL9Q07325 125 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 BOLA3Q53S33 107 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 AGBL2Q5U5Z8 902 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 OTOAQ7RTW8 1153 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 ADCK1Q86TW2 530 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 ARHGAP18Q8N392 663 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 ATP8B4Q8TF62 1192 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 CNTNAP2Q9UHC6 1331 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 TFAP2DQ7Z6R9 452 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 REXO1L1PQ8IX06 675 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 DAGLBQ8NCG7 672 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 FICDQ9BVA6 458 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 CIPCQ9C0C6 399 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 LAMTOR4Q0VGL1 99 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 DNAL1Q4LDG9 190 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 CAPRIN2Q6IMN6 1127 aaKnown RBP19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 ADAM32Q8TC27 787 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 NT5MQ9NPB1 228 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 MED21Q13503 144 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 EARS2Q5JPH6 523 aaKnown RBP19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 DENND1BQ6P3S1 775 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 TMCO5AQ8N6Q1 288 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms