RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 PLCD3Q8N3E9 789 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 AGAP11Q8TF27 550 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 ERP27Q96DN0 273 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 DHRS4Q9BTZ2 278 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 ADAM33Q9BZ11 813 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 RSAD1Q9HA92 442 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 EBF2Q9HAK2 575 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 XPO7Q9UIA9 1087 aaKnown RBP17.19■□□□□ 0.34
HOXD3-201ENST00000249440 TNFSF13BQ9Y275 285 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 IBSPP21815 317 aaPredicted RBP17.19■□□□□ 0.34
HOXD3-201ENST00000249440 SLC26A2P50443 739 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 ATP11AP98196 1134 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 PTPN11Q06124 597 aaPredicted RBP17.19■□□□□ 0.34
HOXD3-201ENST00000249440 EEF1DP3Q658K8 133 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 CDR2LQ86X02 465 aaPredicted RBP17.19■□□□□ 0.34
HOXD3-201ENST00000249440 UNC45BQ8IWX7 931 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 SLC4A11Q8NBS3 891 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 ALKBH8Q96BT7 664 aaKnown RBP17.19■□□□□ 0.34
HOXD3-201ENST00000249440 THOC1Q96FV9 657 aaKnown RBP17.19■□□□□ 0.34
HOXD3-201ENST00000249440 CALN1Q9BXU9 219 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 CDT1Q9H211 546 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 ASNSD1Q9NWL6 643 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 SIX4Q9UIU6 781 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 USP18Q9UMW8 372 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 TRIM33Q9UPN9 1127 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 CHKBQ9Y259 395 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 LRRC37A2A6NM11 1700 aa17.19■□□□□ 0.34
HOXD3-201ENST00000249440 EVPLQ92817 2033 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 RBP3P10745 1247 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 STIP1P31948 543 aaKnown RBP17.18■□□□□ 0.34
HOXD3-201ENST00000249440 GABRB2P47870 512 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 BASP1P80723 227 aaKnown RBP17.18■□□□□ 0.34
HOXD3-201ENST00000249440 WDR78Q5VTH9 848 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 GPATCH11Q8N954 259 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 C1orf127Q8N9H9 656 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 FAM71DQ8N9W8 422 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 SPATA18Q8TC71 538 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 HSPH1Q92598 858 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 ZNF75CPQ92670 426 aaPredicted RBP17.18■□□□□ 0.34
HOXD3-201ENST00000249440 MCRS1Q96EZ8 462 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 TMEM176AQ96HP8 235 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 ZNF668Q96K58 619 aaPredicted RBP17.18■□□□□ 0.34
HOXD3-201ENST00000249440 TM9SF1O15321 606 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 TRUB2O95900 331 aaKnown RBP17.18■□□□□ 0.34
HOXD3-201ENST00000249440 GJB1P08034 283 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 MBTD1Q05BQ5 628 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 ORC1Q13415 861 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 DPYSL3Q14195 570 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 EFTUD2Q15029 972 aaKnown RBP eCLIP17.18■□□□□ 0.34
HOXD3-201ENST00000249440 BBS9Q3SYG4 887 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 FYB2Q5VWT5 728 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 EFCAB12Q6NXP0 572 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 DHX37Q8IY37 1157 aaKnown RBP17.18■□□□□ 0.34
HOXD3-201ENST00000249440 TMEM192Q8IY95 271 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 SDCBP2Q9H190 292 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 L3MBTL1Q9Y468 752 aa17.18■□□□□ 0.34
HOXD3-201ENST00000249440 TCRBV7S3A2A0A539 114 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 CILPO75339 1184 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 MICAL2O94851 1124 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 TMEM63AO94886 807 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 ITGB3P05106 788 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 NFICP08651 508 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 PCK1P35558 622 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 RNASELQ05823 741 aaKnown RBP17.17■□□□□ 0.34
HOXD3-201ENST00000249440 TAB3Q8N5C8 712 aaPredicted RBP17.17■□□□□ 0.34
HOXD3-201ENST00000249440 TRAPPC12Q8WVT3 735 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 L3MBTL3Q96JM7 780 aaPredicted RBP17.17■□□□□ 0.34
HOXD3-201ENST00000249440 SPATA33Q96N06 139 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 TWNKQ96RR1 684 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 CYTH2Q99418 400 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 ADPGKQ9BRR6 497 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 SMARCAD1Q9H4L7 1026 aa17.17■□□□□ 0.34
HOXD3-201ENST00000249440 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.17■□□□□ 0.34
HOXD3-201ENST00000249440 M0QYV0 167 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 ANP32DO95626 131 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 ITGBL1O95965 494 aaPredicted RBP17.16■□□□□ 0.34
HOXD3-201ENST00000249440 HMGCRP04035 888 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 P4HA1P13674 534 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 ATICP31939 592 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 ELF1P32519 619 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 GPD2P43304 727 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 IRX3P78415 501 aaPredicted RBP17.16■□□□□ 0.34
HOXD3-201ENST00000249440 TAF5Q15542 800 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 PARP6Q2NL67 630 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 SPDYAQ5MJ70 313 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 OTOAQ7RTW8 1153 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 MZB1Q8WU39 189 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 C10orf82Q8WW14 230 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 STAMBPL1Q96FJ0 436 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 WDR83Q9BRX9 315 aaKnown RBP17.16■□□□□ 0.34
HOXD3-201ENST00000249440 ELOVL4Q9GZR5 314 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 LRMDAQ9H2I8 198 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 SMYD3Q9H7B4 428 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 CYP3A43Q9HB55 503 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 PRMT7Q9NVM4 692 aaPredicted RBP17.16■□□□□ 0.34
HOXD3-201ENST00000249440 NOP53Q9NZM5 478 aaKnown RBP17.16■□□□□ 0.34
HOXD3-201ENST00000249440 LACTBL1A8MY62 500 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 HBP1O60381 514 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 VDRP11473 427 aa17.16■□□□□ 0.34
HOXD3-201ENST00000249440 RASSF2P50749 326 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms