RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 ETAA1Q9NY74 926 aa20.58■□□□□ 0.89
SOX4-201ENST00000244745 TEKT2Q9UIF3 430 aa20.58■□□□□ 0.89
SOX4-201ENST00000244745 TRAPPC3O43617 180 aa20.58■□□□□ 0.89
SOX4-201ENST00000244745 NFKBIAP25963 317 aa20.58■□□□□ 0.89
SOX4-201ENST00000244745 MIEF2Q96C03 454 aa20.58■□□□□ 0.89
SOX4-201ENST00000244745 C17orf80Q9BSJ5 609 aa20.58■□□□□ 0.89
SOX4-201ENST00000244745 AGO4Q9HCK5 861 aaKnown RBP20.58■□□□□ 0.89
SOX4-201ENST00000244745 CD274Q9NZQ7 290 aa20.58■□□□□ 0.89
SOX4-201ENST00000244745 RPS6KA5O75582 802 aa20.58■□□□□ 0.88
SOX4-201ENST00000244745 TMC2Q8TDI7 906 aa20.58■□□□□ 0.88
SOX4-201ENST00000244745 SLC24A2Q9UI40 661 aa20.58■□□□□ 0.88
SOX4-201ENST00000244745 FAM237AA0A1B0GTK4 181 aa20.58■□□□□ 0.88
SOX4-201ENST00000244745 ZNF263O14978 683 aa20.58■□□□□ 0.88
SOX4-201ENST00000244745 STRNO43815 780 aa20.58■□□□□ 0.88
SOX4-201ENST00000244745 RARAP10276 462 aa20.58■□□□□ 0.88
SOX4-201ENST00000244745 TGM2P21980 687 aa20.58■□□□□ 0.88
SOX4-201ENST00000244745 ILKAPQ9H0C8 392 aaPredicted RBP20.58■□□□□ 0.88
SOX4-201ENST00000244745 NINJ2Q9NZG7 142 aa20.58■□□□□ 0.88
SOX4-201ENST00000244745 SPATA31D1Q6ZQQ2 1576 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 MYO1GB0I1T2 1018 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 TM9SF1O15321 606 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 NCAM1P13591 858 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 SERPINB1P30740 379 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 CCDC15Q0P6D6 951 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 C3orf67Q6ZVT6 689 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 MCOLN2Q8IZK6 566 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 FAM162AQ96A26 154 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.57■□□□□ 0.88
SOX4-201ENST00000244745 NDUFS3O75489 264 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 GARTP22102 1010 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 S100A5P33763 92 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 AADACL2Q6P093 401 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 VPS50Q96JG6 964 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 TRIM54Q9BYV2 358 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 TRPC5OSA6NMA1 111 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 SLC12A3P55017 1021 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 FASTKD5Q7L8L6 764 aaKnown RBP20.57■□□□□ 0.88
SOX4-201ENST00000244745 KCNK18Q7Z418 384 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 B4GALNT2Q8NHY0 566 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 SH3TC2Q8TF17 1288 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 CNDP1Q96KN2 507 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 USP18Q9UMW8 372 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 RUVBL2Q9Y230 463 aaKnown RBP20.57■□□□□ 0.88
SOX4-201ENST00000244745 RPS6KL1Q9Y6S9 549 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 MAGEB2O15479 319 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 BMPR2Q13873 1038 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 ATXN2LQ8WWM7 1075 aaKnown RBP20.57■□□□□ 0.88
SOX4-201ENST00000244745 SIKE1Q9BRV8 207 aa20.57■□□□□ 0.88
SOX4-201ENST00000244745 MRPL28Q13084 256 aaKnown RBP20.56■□□□□ 0.88
SOX4-201ENST00000244745 WLSQ5T9L3 541 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 MFN1Q8IWA4 741 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 BLOC1S6Q9UL45 172 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 RCCD1A6NED2 376 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 PSMC3P17980 439 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 ETFBP38117 255 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 SERPINB8P50452 374 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 COL9A3Q14050 684 aaPredicted RBP20.56■□□□□ 0.88
SOX4-201ENST00000244745 MIIPQ5JXC2 388 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 SHCBP1Q8NEM2 672 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 CLPTM1O96005 669 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 NAMPTP43490 491 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 EMC1Q8N766 993 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 CYP2W1Q8TAV3 490 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 MYOZ2Q9NPC6 264 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 M0R3G1 203 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 HLA-DPA1P20036 260 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 NAPEPLDQ6IQ20 393 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 C2orf69Q8N8R5 385 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 CALML6Q8TD86 181 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 FAM172AQ8WUF8 416 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 GMCL1Q96IK5 515 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 PRPF18Q99633 342 aaKnown RBP20.56■□□□□ 0.88
SOX4-201ENST00000244745 MYLK2Q9H1R3 596 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 MYBL2P10244 700 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 KCNK10P57789 538 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 VPS72Q15906 364 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 ADRM1Q16186 407 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 IL17AQ16552 155 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 GLIS3Q8NEA6 775 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 C10orf88Q9H8K7 445 aa20.56■□□□□ 0.88
SOX4-201ENST00000244745 CTSHP09668 335 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 SLC34A1Q06495 639 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 CATSPERBQ9H7T0 1116 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 PCDHA3Q9Y5H8 950 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 FAM86B1E9PN63 330 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 M0QYT0 321 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 FAM86B2P0C5J1 330 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 OASLQ15646 514 aaKnown RBP20.55■□□□□ 0.88
SOX4-201ENST00000244745 TRIM60Q495X7 471 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 LRRC10BA6NIK2 292 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 OGTO15294 1046 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 HBP1O60381 514 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 AP1G2O75843 785 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 IFNA8P32881 189 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 VCPP55072 806 aaKnown RBP20.55■□□□□ 0.88
SOX4-201ENST00000244745 LRRC8BQ6P9F7 803 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 SLC26A11Q86WA9 606 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 GIMAP4Q9NUV9 329 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 MOSPD1Q9UJG1 213 aa20.55■□□□□ 0.88
SOX4-201ENST00000244745 TNFRSF8P28908 595 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms