RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 RBP3P10745 1247 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 SERPINB10P48595 397 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 ADARP55265 1226 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 N4BP2L1Q5TBK1 243 aaPredicted RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 TTI2Q6NXR4 508 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 WDR93Q6P2C0 686 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 ASPSCR1Q9BZE9 553 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 RIBC2Q9H4K1 309 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 CDC42BPAQ5VT25 1732 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 EPHB6O15197 1021 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 WRNIP1Q96S55 665 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 MRPL4Q9BYD3 311 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 CD209Q9NNX6 404 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 PSMD11O00231 422 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 PHKA2P46019 1235 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 ATP13A4Q4VNC1 1196 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 UTP6Q9NYH9 597 aaKnown RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 NINJ2Q9NZG7 142 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 ZNF839A8K0R7 811 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 BAIAP3O94812 1187 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 NDUFB10O96000 172 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 OCM2P0CE71 109 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 OCMP0CE72 109 aaPredicted RBP7.8□□□□□ -1.16
RIF1-201ENST00000243326 RFX1P22670 979 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 ZNF235Q14590 738 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 EFHC1Q5JVL4 640 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 DCAF15Q66K64 600 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 TMC5Q6UXY8 1006 aa7.8□□□□□ -1.16
RIF1-201ENST00000243326 WDR27A2RRH5 827 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 RIPK2O43353 540 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 NCOA4Q13772 614 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 ADCK2Q7Z695 626 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 YIPF2Q9BWQ6 316 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 NAGPAQ9UK23 515 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 PRRC2BQ5JSZ5 2229 aaKnown RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 ADRA1DP25100 572 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 ALFQ53S48 1182 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 SH3BP5LQ7L8J4 393 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 GTF2A1LQ9UNN4 478 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 RHOBTB1O94844 696 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 MFN2O95140 757 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 SLURP2P0DP57 97 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 ERCC2P18074 760 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 CHRNA5P30532 468 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 DGKDQ16760 1214 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 MECRQ9BV79 373 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 ZRANB3Q5FWF4 1079 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 ARHGAP17Q68EM7 881 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 STRA8Q7Z7C7 330 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 ADGRA1Q86SQ6 560 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 CENPLQ8N0S6 344 aaPredicted RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 OTUD5Q96G74 571 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 TOR3AQ9H497 397 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 CPS1P31327 1500 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 PDXKO00764 312 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 CLPTM1O96005 669 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 FUT4P22083 530 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 RIPOR1Q6ZS17 1223 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 OR6Y1Q8NGX8 325 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 A8MX80 341 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 SLC16A3O15427 465 aaKnown RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 USP12O75317 370 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 RARAP10276 462 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 ATN1P54259 1190 aaPredicted RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 DCAF6Q58WW2 860 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 TBATAQ96M53 351 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 BAATQ14032 418 aaPredicted RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 C7orf57Q8NEG2 295 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 FIG4Q92562 907 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 PHF21BQ96EK2 531 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 TARS2Q9BW92 718 aaKnown RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 CDC42BPGQ6DT37 1551 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 GPD1P21695 349 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 DRD4P21917 467 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 PAN2Q504Q3 1202 aaKnown RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 C3orf20Q8ND61 904 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 ARIH1Q9Y4X5 557 aaPredicted RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 LYPLA1O75608 230 aaPredicted RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 ITGA9Q13797 1035 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 DUOXA2Q1HG44 320 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 ACOT1Q86TX2 421 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 TBCDQ9BTW9 1192 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 ATXN2Q99700 1313 aaKnown RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 TRIM43BA6NCK2 446 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 ELK3P41970 407 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 TCP10LQ8TDR4 215 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 ZNF75CPQ92670 426 aaPredicted RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 NUDT12Q9BQG2 462 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 IL1RAPL1Q9NZN1 696 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 LSM1O15116 133 aaKnown RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 MZF1P28698 734 aaPredicted RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 ATG14Q6ZNE5 492 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 AMIGO2Q86SJ2 522 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 DUSP9Q99956 384 aaKnown RBP7.79□□□□□ -1.16
RIF1-201ENST00000243326 RXFP1Q9HBX9 757 aa7.79□□□□□ -1.16
RIF1-201ENST00000243326 GRIK1P39086 918 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 BNC2Q6ZN30 1099 aaPredicted RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 TMEM179Q6ZVK1 233 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 NAT16Q8N8M0 369 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms