RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 MTSS1LQ765P7 747 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 ERAP1Q9NZ08 941 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 C17orf102A2RUQ5 167 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 KCNA3P22001 575 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 TRAF2Q12933 501 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 PDK1Q15118 436 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 SGSM1Q2NKQ1 1148 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 C19orf60Q96EN9 201 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 CAMKK2Q96RR4 588 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 ELL3Q9HB65 397 aaPredicted RBP13.68□□□□□ -0.22
NEK9-201ENST00000238616 SH3BP4Q9P0V3 963 aa13.68□□□□□ -0.22
NEK9-201ENST00000238616 TFE3P19532 575 aaPredicted RBP13.67□□□□□ -0.22
NEK9-201ENST00000238616 ATP6V1B2P21281 511 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 CYP24A1Q07973 514 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 DENND5BQ6ZUT9 1274 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 CYP4Z1Q86W10 505 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 MTFMTQ96DP5 389 aaKnown RBP13.67□□□□□ -0.22
NEK9-201ENST00000238616 ZNF512BQ96KM6 892 aaPredicted RBP13.67□□□□□ -0.22
NEK9-201ENST00000238616 RHOBTB2Q9BYZ6 727 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 SERHL2Q9H4I8 314 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 SERHLQ9NQF3 203 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 ITGA3P26006 1051 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 EPHB2P29323 1055 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 ZNF618Q5T7W0 954 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 KLHL17Q6TDP4 642 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 GLT1D1Q96MS3 346 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 LY9Q9HBG7 655 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 PTPRHQ9HD43 1115 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 KATNA1O75449 491 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 SOAT2O75908 522 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 CLTBP09497 229 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 CYP2C9P11712 490 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 BAATQ14032 418 aaPredicted RBP13.67□□□□□ -0.22
NEK9-201ENST00000238616 ACOX1Q15067 660 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 ZNF284Q2VY69 593 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 EDRF1Q3B7T1 1238 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 TIGD7Q6NT04 549 aaPredicted RBP13.67□□□□□ -0.22
NEK9-201ENST00000238616 FRMD6Q96NE9 622 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 ACSL4O60488 711 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 UBTFL6P0CB48 400 aaPredicted RBP13.67□□□□□ -0.22
NEK9-201ENST00000238616 AFF2P51816 1311 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 AP3M2P53677 418 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 FCGRTP55899 365 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 DSG4Q86SJ6 1040 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 ABCC2Q92887 1545 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 M0QYT0 321 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 STX7O15400 261 aaKnown RBP13.67□□□□□ -0.22
NEK9-201ENST00000238616 ZNF24P17028 368 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 KLRC2P26717 231 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 TALDO1P37837 337 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 CPA2P48052 419 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 KLC1Q07866 573 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 ATP6V0D2Q8N8Y2 350 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 RNFT2Q96EX2 444 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 RPRD1AQ96P16 312 aaPredicted RBP13.67□□□□□ -0.22
NEK9-201ENST00000238616 PCDHB12Q9Y5F1 795 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 TMEM94Q12767 1356 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 SH3BGRLO75368 114 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 SPRP35270 261 aaPredicted RBP13.67□□□□□ -0.22
NEK9-201ENST00000238616 MAGEA9P43362 315 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 DHX34Q14147 1143 aaKnown RBP13.67□□□□□ -0.22
NEK9-201ENST00000238616 USP13Q92995 863 aaPredicted RBP13.67□□□□□ -0.22
NEK9-201ENST00000238616 DDIT4Q9NX09 232 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 PSMC3IPQ9P2W1 217 aaPredicted RBP13.67□□□□□ -0.22
NEK9-201ENST00000238616 APEX2Q9UBZ4 518 aa13.67□□□□□ -0.22
NEK9-201ENST00000238616 LOC100653049A0A140TA62 436 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 ATP8B1O43520 1251 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 KRT34O76011 436 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 CHN1P15882 459 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 AGAP9Q5VTM2 703 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 HLA-DQA1Q5Y7H0 255 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 GPRC5AQ8NFJ5 357 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 ZNF23P17027 643 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 TCEAL5Q5H9L2 206 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 CYP20A1Q6UW02 462 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 CLPBQ9H078 707 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 CHORDC1Q9UHD1 332 aaPredicted RBP13.66□□□□□ -0.22
NEK9-201ENST00000238616 LBPP18428 481 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 SYNMO15061 1565 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 SNTNA6NMZ2 147 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 DCDC2CA8MYV0 355 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 PLA2G6O60733 806 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 IL18RAPO95256 599 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 PTGER2P43116 358 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 FNTAP49354 379 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 SRSF11Q05519 484 aaKnown RBP13.66□□□□□ -0.22
NEK9-201ENST00000238616 CBFBQ13951 182 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 GPAT2Q6NUI2 795 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 RBBP8Q99708 897 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 IL1RAPL1Q9NZN1 696 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 VPS28Q9UK41 221 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 ENO4A6NNW6 628 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 NDUFS2O75306 463 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 VTNP04004 478 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 GTF2H1P32780 548 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 PRKCEQ02156 737 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 ZCCHC8Q6NZY4 707 aaKnown RBP13.66□□□□□ -0.22
NEK9-201ENST00000238616 DOK6Q6PKX4 331 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 POTEAQ6S8J7 498 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 RFFLQ8WZ73 363 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms