RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 TAS1R1Q7RTX1 841 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 TMEM173Q86WV6 379 aaPredicted RBP11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 CCDC50Q8IVM0 306 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 SPPL3Q8TCT6 385 aa11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 EIF3CQ99613 913 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-201ENST00000237289 GRAP2O75791 330 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 NCAM1P13591 858 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 PRKCIP41743 596 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 TWF1Q12792 350 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 CLEC16AQ2KHT3 1053 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 ARL13BQ3SXY8 428 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 HS1BP3Q53T59 392 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 C10orf120Q5SQS8 335 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 CCAR2Q8N163 923 aaKnown RBP11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 TWNKQ96RR1 684 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 NCAPGQ9BPX3 1015 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 MAK16Q9BXY0 300 aaKnown RBP11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 ANAPC7Q9UJX3 599 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 COLQQ9Y215 455 aaPredicted RBP11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 TYW5A2RUC4 315 aaKnown RBP11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 VAV2P52735 878 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 NAB2Q15742 525 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 ZSCAN30Q86W11 494 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 KIAA1524Q8TCG1 905 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 SMG7Q92540 1137 aaKnown RBP11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 CASP10Q92851 521 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 PLEKHA4Q9H4M7 779 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 ASNSD1Q9NWL6 643 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 CLDND1Q9NY35 253 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 PPP2R2CQ9Y2T4 447 aa11.71□□□□□ -0.53
TNFAIP3-201ENST00000237289 A0A087X0T9 212 aa11.71□□□□□ -0.54
TNFAIP3-201ENST00000237289 KIF2AO00139 706 aaPredicted RBP11.71□□□□□ -0.54
TNFAIP3-201ENST00000237289 HCRTO43612 131 aa11.71□□□□□ -0.54
TNFAIP3-201ENST00000237289 FAM228BP0C875 321 aa11.71□□□□□ -0.54
TNFAIP3-201ENST00000237289 GALCP54803 685 aa11.71□□□□□ -0.54
TNFAIP3-201ENST00000237289 TBX2Q13207 712 aaPredicted RBP11.71□□□□□ -0.54
TNFAIP3-201ENST00000237289 ARHGAP17Q68EM7 881 aa11.71□□□□□ -0.54
TNFAIP3-201ENST00000237289 CC2D1AQ6P1N0 951 aaPredicted RBP11.71□□□□□ -0.54
TNFAIP3-201ENST00000237289 PEX26Q7Z412 305 aa11.71□□□□□ -0.54
TNFAIP3-201ENST00000237289 GPR152Q8TDT2 470 aa11.71□□□□□ -0.54
TNFAIP3-201ENST00000237289 NUP85Q9BW27 656 aa11.71□□□□□ -0.54
TNFAIP3-201ENST00000237289 ARHGAP20Q9P2F6 1191 aa11.71□□□□□ -0.54
TNFAIP3-201ENST00000237289 H3BNC9 293 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 XPO1O14980 1071 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 CCL16O15467 120 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 ZBED1O96006 694 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 CKMP06732 381 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 CNPP09543 421 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 PDGFRAP16234 1089 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 DCAF6Q58WW2 860 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 ZNF569Q5MCW4 686 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 ATAT1Q5SQI0 421 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 UBL4BQ8N7F7 174 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 MRPL43Q8N983 215 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 LNX1Q8TBB1 728 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 CLP1Q92989 425 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 KLHL5Q96PQ7 755 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 NSUN3Q9H649 340 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 MRPS23Q9Y3D9 190 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 AVPR1AP37288 418 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 NME3Q13232 169 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 CCDC85BQ15834 202 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 LPIN3Q9BQK8 851 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 B3GNT5Q9BYG0 378 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 ULBP1Q9BZM6 244 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 ZCWPW1Q9H0M4 648 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 AMFRQ9UKV5 643 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 YBX2Q9Y2T7 364 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 MTMR11A4FU01 709 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 ZNF197O14709 1029 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 PRPSAP2O60256 369 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 CASQ1P31415 396 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 JAM2P57087 298 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 PDCLQ13371 301 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 C2CD6Q53TS8 623 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 RNF19BQ6ZMZ0 732 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 SCUBE3Q8IX30 993 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 YAF2Q8IY57 180 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 PDZD8Q8NEN9 1154 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 OR10T2Q8NGX3 314 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 ZNF564Q8TBZ8 553 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 KBTBD7Q8WVZ9 684 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 MAN1C1Q9NR34 630 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 CHORDC1Q9UHD1 332 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 LCMT1Q9UIC8 334 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 LSM7Q9UK45 103 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 ARID2Q68CP9 1835 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 RFXAPO00287 272 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 APOEP02649 317 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 USP17L7P0C7H9 530 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 GBP2P32456 591 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 ATP11AP98196 1134 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 IRF2BP2Q7Z5L9 587 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 ZDHHC17Q8IUH5 632 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 TFAP2BQ92481 460 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 TMEM209Q96SK2 561 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 LHX5Q9H2C1 402 aa11.7□□□□□ -0.54
TNFAIP3-201ENST00000237289 ABCB6Q9NP58 842 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms