RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 KCNH4Q9UQ05 1017 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 NUMBLQ9Y6R0 609 aa16.28■□□□□ 0.2
CTSD-201ENST00000236671 IGKV6D-21A0A0A0MT36 114 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 BTBD19C9JJ37 291 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 CST8O60676 142 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 TMEM63AO94886 807 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 WEE2P0C1S8 567 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 CYP2C8P10632 490 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 GM2AP17900 193 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 GNAZP19086 355 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 ICAM3P32942 547 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 RPL22P35268 128 aaKnown RBP16.27■□□□□ 0.2
CTSD-201ENST00000236671 RFC5P40937 340 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 TARBP2Q15633 366 aaKnown RBP16.27■□□□□ 0.2
CTSD-201ENST00000236671 KLHL38Q2WGJ6 581 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 TAF1BQ53T94 588 aaPredicted RBP16.27■□□□□ 0.2
CTSD-201ENST00000236671 PLEKHG4Q58EX7 1191 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 DENND1BQ6P3S1 775 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 ZBTB33Q86T24 672 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 RHPN2Q8IUC4 686 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 FBXO36Q8NEA4 188 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 JOSD2Q8TAC2 188 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 ZNF398Q8TD17 642 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 DCAKDQ8WVC6 231 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 ZWILCHQ9H900 591 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 TJP2Q9UDY2 1190 aa16.27■□□□□ 0.2
CTSD-201ENST00000236671 TCRBV7S3A2A0A539 114 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 MSCO60682 206 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 EPHB2P29323 1055 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 ASPAP45381 313 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 RNASELQ05823 741 aaKnown RBP16.27■□□□□ 0.19
CTSD-201ENST00000236671 KCNT1Q5JUK3 1230 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 FYB2Q5VWT5 728 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 SCARA5Q6ZMJ2 495 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 C3orf62Q6ZUJ4 267 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 LONP2Q86WA8 852 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 KIAA0319LQ8IZA0 1049 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 BANPQ8N9N5 519 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 TCP10LQ8TDR4 215 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 HHIPL1Q96JK4 782 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 C12orf42Q96LP6 360 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 PCYT2Q99447 389 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 R3HDMLQ9H3Y0 253 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 KANSL3Q9P2N6 904 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 CYTH4Q9UIA0 394 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 STRIP2Q9ULQ0 834 aa16.27■□□□□ 0.19
CTSD-201ENST00000236671 SIGLEC16A6NMB1 481 aa16.26■□□□□ 0.19
CTSD-201ENST00000236671 KRT7P08729 469 aa16.26■□□□□ 0.19
CTSD-201ENST00000236671 KDELR1P24390 212 aa16.26■□□□□ 0.19
CTSD-201ENST00000236671 SNAPC2Q13487 334 aa16.26■□□□□ 0.19
CTSD-201ENST00000236671 CTC1Q2NKJ3 1217 aa16.26■□□□□ 0.19
CTSD-201ENST00000236671 SGSM1Q2NKQ1 1148 aa16.26■□□□□ 0.19
CTSD-201ENST00000236671 TTC13Q8NBP0 860 aa16.26■□□□□ 0.19
CTSD-201ENST00000236671 KCNV2Q8TDN2 545 aa16.26■□□□□ 0.19
CTSD-201ENST00000236671 AS3MTQ9HBK9 375 aa16.26■□□□□ 0.19
CTSD-201ENST00000236671 ZFP69BQ9UJL9 534 aa16.26■□□□□ 0.19
CTSD-201ENST00000236671 CEP83Q9Y592 693 aa16.26■□□□□ 0.19
CTSD-201ENST00000236671 TM9SF1O15321 606 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 TOM1L1O75674 476 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 CD48P09326 243 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 KRT3P12035 628 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 CALB2P22676 271 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 RASSF2P50749 326 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 MTM1Q13496 603 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 STXBP2Q15833 593 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 DUOXA2Q1HG44 320 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 TAB3Q8N5C8 712 aaPredicted RBP16.25■□□□□ 0.19
CTSD-201ENST00000236671 FNIP1Q8TF40 1166 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 RSAD2Q8WXG1 361 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 ANKRD27Q96NW4 1050 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 XYLT2Q9H1B5 865 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 C12orf65Q9H3J6 166 aaKnown RBP16.25■□□□□ 0.19
CTSD-201ENST00000236671 TLE6Q9H808 572 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 SLC17A7Q9P2U7 560 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 LNPEPQ9UIQ6 1025 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 WDR91A4D1P6 747 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 ABLIM1O14639 778 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 TPBGLP0DKB5 382 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 ZNF699Q32M78 642 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 CLNKQ7Z7G1 428 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 MTDHQ86UE4 582 aaKnown RBP16.25■□□□□ 0.19
CTSD-201ENST00000236671 UNC45BQ8IWX7 931 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 THNSL1Q8IYQ7 743 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 ENDOVQ8N8Q3 282 aaKnown RBP16.25■□□□□ 0.19
CTSD-201ENST00000236671 RFWD2Q8NHY2 731 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 STK32AQ8WU08 396 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 PTPRN2Q92932 1015 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 ALKBH8Q96BT7 664 aaKnown RBP16.25■□□□□ 0.19
CTSD-201ENST00000236671 TCHPQ9BT92 498 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 MRPL4Q9BYD3 311 aaKnown RBP16.25■□□□□ 0.19
CTSD-201ENST00000236671 VPS11Q9H270 941 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 SAR1AQ9NR31 198 aa16.25■□□□□ 0.19
CTSD-201ENST00000236671 XPO7Q9UIA9 1087 aaKnown RBP16.25■□□□□ 0.19
CTSD-201ENST00000236671 ZSWIM8A7E2V4 1837 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 GOLGA8RI6L899 631 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 HOXC6P09630 235 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 TROVE2P10155 538 aaKnown RBP eCLIP16.24■□□□□ 0.19
CTSD-201ENST00000236671 UBA1P22314 1058 aaKnown RBP16.24■□□□□ 0.19
CTSD-201ENST00000236671 GTF2A2P52657 109 aa16.24■□□□□ 0.19
CTSD-201ENST00000236671 TRPC3Q13507 836 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms