RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 ZMIZ2Q8NF64 920 aa19.58■□□□□ 0.73
SNX17-201ENST00000233575 USTQ9Y2C2 406 aa19.58■□□□□ 0.73
SNX17-201ENST00000233575 SF3B1O75533 1304 aaKnown RBP eCLIP19.58■□□□□ 0.723e-6■■■■■ 137.9
SNX17-201ENST00000233575 UQCRHLA0A096LP55 91 aa19.58■□□□□ 0.72
SNX17-201ENST00000233575 SYN3O14994 580 aa19.58■□□□□ 0.72
SNX17-201ENST00000233575 AP1G2O75843 785 aa19.58■□□□□ 0.72
SNX17-201ENST00000233575 UQCRHP07919 91 aa19.58■□□□□ 0.72
SNX17-201ENST00000233575 FAM200BP0CF97 657 aa19.58■□□□□ 0.72
SNX17-201ENST00000233575 RPL34P49207 117 aaKnown RBP19.58■□□□□ 0.72
SNX17-201ENST00000233575 RNASE9P60153 205 aaKnown RBP19.58■□□□□ 0.72
SNX17-201ENST00000233575 TRNP1Q6NT89 227 aa19.58■□□□□ 0.72
SNX17-201ENST00000233575 MNS1Q8NEH6 495 aa19.58■□□□□ 0.72
SNX17-201ENST00000233575 PTPRDP23468 1912 aa19.57■□□□□ 0.72
SNX17-201ENST00000233575 ZBBXA8MT70 800 aa19.57■□□□□ 0.72
SNX17-201ENST00000233575 F8VP50 259 aa19.57■□□□□ 0.72
SNX17-201ENST00000233575 TCF4P15884 667 aa19.57■□□□□ 0.72
SNX17-201ENST00000233575 BDNFP23560 247 aa19.57■□□□□ 0.72
SNX17-201ENST00000233575 ALDH7A1P49419 539 aaKnown RBP19.57■□□□□ 0.72
SNX17-201ENST00000233575 RTP2Q5QGT7 225 aa19.57■□□□□ 0.72
SNX17-201ENST00000233575 NDRG1Q92597 394 aaKnown RBP19.57■□□□□ 0.72
SNX17-201ENST00000233575 KHSRPQ92945 711 aaKnown RBP eCLIP19.57■□□□□ 0.72
SNX17-201ENST00000233575 CXXC1Q9P0U4 656 aaPredicted RBP19.57■□□□□ 0.72
SNX17-201ENST00000233575 IP6K2Q9UHH9 426 aa19.57■□□□□ 0.72
SNX17-201ENST00000233575 EFCAB14O75071 495 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 BAIAP3O94812 1187 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 FGFR3P22607 806 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 PEX5P50542 639 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 TAS2R40P59535 323 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 TSPY1Q01534 308 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 FPGSQ05932 587 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 ADIGQ0VDE8 80 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 ZNF211Q13398 564 aaPredicted RBP19.56■□□□□ 0.72
SNX17-201ENST00000233575 AADACL2Q6P093 401 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 GPRIN1Q7Z2K8 1008 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 VN1R3Q9BXE9 311 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 CTNNA1P35221 906 aaKnown RBP19.56■□□□□ 0.72
SNX17-201ENST00000233575 FLT3P36888 993 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 NDUFV1P49821 464 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 TAP1Q03518 808 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 MRPL58Q14197 206 aaKnown RBP19.56■□□□□ 0.72
SNX17-201ENST00000233575 BTG3Q14201 252 aaPredicted RBP19.56■□□□□ 0.72
SNX17-201ENST00000233575 SLC39A12Q504Y0 691 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 SMARCD1Q96GM5 515 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 HSFY1Q96LI6 401 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 TMEM59LQ9UK28 342 aa19.56■□□□□ 0.72
SNX17-201ENST00000233575 MRPL42Q9Y6G3 142 aaKnown RBP19.56■□□□□ 0.72
SNX17-201ENST00000233575 TADA3O75528 432 aa19.55■□□□□ 0.72
SNX17-201ENST00000233575 FGBP02675 491 aa19.55■□□□□ 0.72
SNX17-201ENST00000233575 SLC8A3P57103 927 aa19.55■□□□□ 0.72
SNX17-201ENST00000233575 SLC6A3Q01959 620 aa19.55■□□□□ 0.72
SNX17-201ENST00000233575 PPIGQ13427 754 aaKnown RBP eCLIP19.55■□□□□ 0.721e-6■■■□□ 14.9
SNX17-201ENST00000233575 SPOUT1Q5T280 376 aaKnown RBP19.55■□□□□ 0.72
SNX17-201ENST00000233575 RSPO2Q6UXX9 243 aaPredicted RBP19.55■□□□□ 0.72
SNX17-201ENST00000233575 CEP112Q8N8E3 955 aa19.55■□□□□ 0.72
SNX17-201ENST00000233575 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.55■□□□□ 0.722e-6■■■□□ 17.8
SNX17-201ENST00000233575 ZCWPW1Q9H0M4 648 aa19.55■□□□□ 0.72
SNX17-201ENST00000233575 MIF4GDA9UHW6 222 aaKnown RBP19.54■□□□□ 0.72
SNX17-201ENST00000233575 CEP104O60308 925 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 EFEMP2O95967 443 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 PSMA2P25787 234 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 SLC1A1P43005 524 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 ADCY1Q08828 1119 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 CTXN3Q4LDR2 81 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 KCNT2Q6UVM3 1135 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.54■□□□□ 0.72
SNX17-201ENST00000233575 IGSF21Q96ID5 467 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 ZMYND8Q9ULU4 1186 aaPredicted RBP19.54■□□□□ 0.72
SNX17-201ENST00000233575 PCDHA3Q9Y5H8 950 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 HHLA1C9JL84 531 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 CTIFO43310 598 aaKnown RBP19.54■□□□□ 0.72
SNX17-201ENST00000233575 CTNNA2P26232 953 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 GTF2F1P35269 517 aaKnown RBP eCLIP19.54■□□□□ 0.72
SNX17-201ENST00000233575 RAB6CQ53S08 254 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 TMEM240Q5SV17 173 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 PRSS55Q6UWB4 352 aaPredicted RBP19.54■□□□□ 0.72
SNX17-201ENST00000233575 ARFGAP1Q8N6T3 406 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 KCTD13Q8WZ19 329 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 PGLYRP2Q96PD5 576 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 YME1L1Q96TA2 773 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 RAB6CQ9H0N0 254 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 CSNK1G1Q9HCP0 422 aa19.54■□□□□ 0.72
SNX17-201ENST00000233575 CTAGE15A4D2H0 777 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 C2CD4BA6NLJ0 364 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 CTAGE8P0CG41 777 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 CYP2F1P24903 491 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 MAN1A1P33908 653 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 SSR1P43307 286 aaKnown RBP19.53■□□□□ 0.72
SNX17-201ENST00000233575 ACADSBP45954 432 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 TERF1P54274 439 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 SH3PXD2AQ5TCZ1 1133 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 CCDC181Q5TID7 509 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 CC2D1AQ6P1N0 951 aaPredicted RBP19.53■□□□□ 0.72
SNX17-201ENST00000233575 CTAGE6Q86UF2 777 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 CTAGE4Q8IX94 777 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 CMTR2Q8IYT2 770 aaKnown RBP19.53■□□□□ 0.72
SNX17-201ENST00000233575 UBL4BQ8N7F7 174 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 NOA1Q8NC60 698 aaKnown RBP19.53■□□□□ 0.72
SNX17-201ENST00000233575 RXFP2Q8WXD0 754 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 PBKQ96KB5 322 aa19.53■□□□□ 0.72
SNX17-201ENST00000233575 CYLDQ9NQC7 956 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms