RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 UNC45BQ8IWX7 931 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 FAM111AQ96PZ2 611 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 TMEM39BQ9GZU3 492 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 KLK14Q9P0G3 267 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 DUX4Q9UBX2 424 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 SEPT3Q9UH03 358 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 RUVBL2Q9Y230 463 aaKnown RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 C2CD2LO14523 706 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 WBP4O75554 376 aaKnown RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 SLC2A3P11169 496 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 SLC11A2P49281 568 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 BOLA3Q53S33 107 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 FRMD8P1Q9BZ68 369 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-201ENST00000230538 DDIT4Q9NX09 232 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 DCDC2Q9UHG0 476 aa11.98□□□□□ -0.49
LAMA4-201ENST00000230538 KIF1CO43896 1103 aaKnown RBP11.97□□□□□ -0.49
LAMA4-201ENST00000230538 PSMA4P25789 261 aaKnown RBP11.97□□□□□ -0.49
LAMA4-201ENST00000230538 PRIM2P49643 509 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 SLC16A1P53985 500 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 DNAJC3Q13217 504 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 KBTBD12Q3ZCT8 623 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 CHMP1BQ7LBR1 199 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 REXO1L1PQ8IX06 675 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 ZSWIM1Q9BR11 485 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 THUMPD3Q9BV44 507 aaKnown RBP11.97□□□□□ -0.49
LAMA4-201ENST00000230538 CAPN10Q9HC96 672 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 CCL15-CCL14A0A0B4J2E2 113 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 CSF1RP07333 972 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 CETPP11597 493 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 HSPA13P48723 471 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 IRAK1P51617 712 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 CCDC15Q0P6D6 951 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 ORC1Q13415 861 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 CCL15Q16663 113 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 TTC33Q6PID6 262 aaPredicted RBP11.97□□□□□ -0.49
LAMA4-201ENST00000230538 ARID3BQ8IVW6 561 aaPredicted RBP11.97□□□□□ -0.49
LAMA4-201ENST00000230538 TRIM48Q8IWZ4 208 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 GPRASP2Q96D09 838 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 CLTCQ00610 1675 aaKnown RBP11.97□□□□□ -0.49
LAMA4-201ENST00000230538 GLRA3O75311 464 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 KCNB2Q92953 911 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 ERGIC2Q96RQ1 377 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 UBQLN1Q9UMX0 589 aaKnown RBP11.97□□□□□ -0.49
LAMA4-201ENST00000230538 RNF103O00237 685 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 PON1P27169 355 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 STIP1P31948 543 aaKnown RBP11.97□□□□□ -0.49
LAMA4-201ENST00000230538 SERPINB8P50452 374 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 ALDH6A1Q02252 535 aaKnown RBP11.97□□□□□ -0.49
LAMA4-201ENST00000230538 CEP78Q5JTW2 689 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 OSBPL10Q9BXB5 764 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 NDEL1Q9GZM8 345 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 PNMA8BQ9ULN7 279 aaPredicted RBP11.97□□□□□ -0.49
LAMA4-201ENST00000230538 DDHD2O94830 711 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 CNTN1Q12860 1018 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 OVGP1Q12889 678 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 CSTF3Q12996 717 aaKnown RBP11.97□□□□□ -0.49
LAMA4-201ENST00000230538 STX5Q13190 355 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 TRIP4Q15650 581 aaPredicted RBP11.97□□□□□ -0.49
LAMA4-201ENST00000230538 MRNIPQ6NTE8 343 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 NYAP1Q6ZVC0 841 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 BHMTQ93088 406 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 C17orf75Q9HAS0 396 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 SCUBE2Q9NQ36 999 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 NEXMIFQ5QGS0 1516 aa11.97□□□□□ -0.49
LAMA4-201ENST00000230538 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.96□□□□□ -0.49
LAMA4-201ENST00000230538 UBE2Q2LH0YL09 131 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 GAS2O43903 313 aaKnown RBP11.96□□□□□ -0.49
LAMA4-201ENST00000230538 SERPINB5P36952 375 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 ANGPT1Q15389 498 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 SEZ6Q53EL9 994 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 MICU2Q8IYU8 434 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 LRRC34Q8IZ02 419 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 USP13Q92995 863 aaPredicted RBP11.96□□□□□ -0.49
LAMA4-201ENST00000230538 ATG4CQ96DT6 458 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 CD248Q9HCU0 757 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 NMRK2Q9NPI5 230 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 PHTF1Q9UMS5 762 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 AAR2Q9Y312 384 aaKnown RBP11.96□□□□□ -0.49
LAMA4-201ENST00000230538 ENO4A6NNW6 628 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 MSH4O15457 936 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 SKAP2O75563 359 aaPredicted RBP11.96□□□□□ -0.49
LAMA4-201ENST00000230538 TOMM70O94826 608 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 CHI3L1P36222 383 aaPredicted RBP11.96□□□□□ -0.49
LAMA4-201ENST00000230538 VHLP40337 213 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 NCKAP1LP55160 1127 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 DSG1Q02413 1049 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 POLD3Q15054 466 aaPredicted RBP11.96□□□□□ -0.49
LAMA4-201ENST00000230538 GNASQ5JWF2 1037 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 NUDT12Q9BQG2 462 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 IMPAD1Q9NX62 359 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 GTF3C4Q9UKN8 822 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 NCF1BA6NI72 391 aaPredicted RBP11.96□□□□□ -0.49
LAMA4-201ENST00000230538 NCF1CA8MVU1 366 aaPredicted RBP11.96□□□□□ -0.49
LAMA4-201ENST00000230538 F5H5T6 163 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 AP1G2O75843 785 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 SUPT7LO94864 414 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 NCF1P14598 390 aaPredicted RBP11.96□□□□□ -0.49
LAMA4-201ENST00000230538 SERPINB3P29508 390 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 PWP1Q13610 501 aa11.96□□□□□ -0.49
LAMA4-201ENST00000230538 GALNTL6Q49A17 601 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms