RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 HABP4Q5JVS0 413 aaKnown RBP17.45■□□□□ 0.38
PTK7-202ENST00000230419 TMEM63BQ5T3F8 832 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 RASSF3Q86WH2 238 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 JOSD2Q8TAC2 188 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.45■□□□□ 0.387e-12■■□□□ 12.8
PTK7-202ENST00000230419 APOBEC2Q9Y235 224 aaKnown RBP17.45■□□□□ 0.38
PTK7-202ENST00000230419 USH1CQ9Y6N9 552 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 MYH15Q9Y2K3 1946 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 TJP1Q07157 1748 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 E5RJQ4 531 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 TRAPPC3O43617 180 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 IL18RAPO95256 599 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 GEMIN4P57678 1058 aaKnown RBP17.45■□□□□ 0.38
PTK7-202ENST00000230419 DEUP1Q05D60 604 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 AUHQ13825 339 aaKnown RBP17.45■□□□□ 0.38
PTK7-202ENST00000230419 SMG5Q9UPR3 1016 aaKnown RBP17.45■□□□□ 0.38
PTK7-202ENST00000230419 ELK3P41970 407 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 SKOR1P84550 965 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 C1QBPQ07021 282 aaKnown RBP17.45■□□□□ 0.38
PTK7-202ENST00000230419 ZNF516Q92618 1163 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 TNIP3Q96KP6 325 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 LPIN3Q9BQK8 851 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 APOBEC3GQ9HC16 384 aaKnown RBP17.45■□□□□ 0.38
PTK7-202ENST00000230419 L3MBTL1Q9Y468 752 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 MYH7P12883 1935 aa17.45■□□□□ 0.38
PTK7-202ENST00000230419 VCPP55072 806 aaKnown RBP17.44■□□□□ 0.38
PTK7-202ENST00000230419 NDRG1Q92597 394 aaKnown RBP17.44■□□□□ 0.38
PTK7-202ENST00000230419 SGF29Q96ES7 293 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 TMEM237Q96Q45 408 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 VCX3BQ9H321 246 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 GOLGA2P5Q9HBQ8 144 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 SPATA31C2B4DYI2 1134 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 M0QYT0 321 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 NCAM1P13591 858 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 TPD52P55327 224 aaPredicted RBP17.44■□□□□ 0.38
PTK7-202ENST00000230419 LAMC2Q13753 1193 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 PCSK7Q16549 785 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 RASIP1Q5U651 963 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 BZW1Q7L1Q6 419 aaKnown RBP17.44■□□□□ 0.38
PTK7-202ENST00000230419 SKA2Q8WVK7 121 aaPredicted RBP17.44■□□□□ 0.38
PTK7-202ENST00000230419 PPWD1Q96BP3 646 aaKnown RBP17.44■□□□□ 0.38
PTK7-202ENST00000230419 B3GNT5Q9BYG0 378 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 VCXQ9H320 206 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 GTSE1Q9NYZ3 720 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 NCANO14594 1321 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 SPECC1L-ADORA2AF8WAN1 911 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 CES2O00748 559 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 NPM3O75607 178 aaKnown RBP17.44■□□□□ 0.38
PTK7-202ENST00000230419 CRADDP78560 199 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 DCAF12L1Q5VU92 463 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 GBP5Q96PP8 586 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 DMAC2Q9NW81 257 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 NR2E3Q9Y5X4 410 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 ASAP2O43150 1006 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 NCKAP1LP55160 1127 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 LRRC6Q86X45 466 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 CCDC117Q8IWD4 279 aaPredicted RBP17.44■□□□□ 0.38
PTK7-202ENST00000230419 C7orf43Q8WVR3 580 aa17.44■□□□□ 0.38
PTK7-202ENST00000230419 USP12O75317 370 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 PYGBP11216 843 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 COPS2P61201 443 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 NOMO3P69849 1222 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 SAMD3Q8N6K7 520 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 ZNF669Q96BR6 464 aaPredicted RBP17.43■□□□□ 0.38
PTK7-202ENST00000230419 RMDN2Q96LZ7 410 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 ZNF560Q96MR9 790 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 SPON2Q9BUD6 331 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 NOD2Q9HC29 1040 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 SLC24A3Q9HC58 644 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 SLCO1B3Q9NPD5 702 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 PRG3Q9Y2Y8 225 aaPredicted RBP17.43■□□□□ 0.38
PTK7-202ENST00000230419 TOGARAM1Q9Y4F4 1720 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 H3BRJ5 948 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 TRPA1O75762 1119 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 MICAL2O94851 1124 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 CYP1A2P05177 515 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 SOX11P35716 441 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 CHI3L2Q15782 390 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 AFAP1L2Q8N4X5 818 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 DNERQ8NFT8 737 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 EDEM1Q92611 657 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 FAM136AQ96C01 138 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 SENP1Q9P0U3 644 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 CACNG4Q9UBN1 327 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 KCNK1O00180 336 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 GABPB2Q8TAK5 448 aaPredicted RBP17.43■□□□□ 0.38
PTK7-202ENST00000230419 GMLQ99445 158 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 MANSC1Q9H8J5 431 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 DDIT4Q9NX09 232 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 PAK5Q9P286 719 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 HEY2Q9UBP5 337 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 EP400Q96L91 3159 aa17.43■□□□□ 0.38
PTK7-202ENST00000230419 ACKR2O00590 384 aa17.42■□□□□ 0.38
PTK7-202ENST00000230419 AVILO75366 819 aa17.42■□□□□ 0.38
PTK7-202ENST00000230419 USP2O75604 605 aaPredicted RBP17.42■□□□□ 0.38
PTK7-202ENST00000230419 CCDC130P13994 396 aa17.42■□□□□ 0.38
PTK7-202ENST00000230419 TAF5Q15542 800 aa17.42■□□□□ 0.38
PTK7-202ENST00000230419 BHMTQ93088 406 aa17.42■□□□□ 0.38
PTK7-202ENST00000230419 CDT1Q9H211 546 aa17.42■□□□□ 0.38
PTK7-202ENST00000230419 FARP2O94887 1054 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms