RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 ASCC2Q9H1I8 757 aaPredicted RBP13.21□□□□□ -0.3
PITRM1-201ENST00000224949 EBF3Q9H4W6 596 aa13.21□□□□□ -0.3
PITRM1-201ENST00000224949 TMEM191CA6NGB0 347 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 PIK3R2O00459 728 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 TMEM191BP0C7N4 346 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 RBP3P10745 1247 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 HOXA10P31260 410 aaPredicted RBP13.2□□□□□ -0.3
PITRM1-201ENST00000224949 CC2D2BQ6DHV5 1058 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 NPNTQ6UXI9 565 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 FAM43BQ6ZT52 329 aaPredicted RBP13.2□□□□□ -0.3
PITRM1-201ENST00000224949 RAPH1Q70E73 1250 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 TMPRSS6Q8IU80 811 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 GATA6Q92908 595 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 POLR3FQ9H1D9 316 aaPredicted RBP13.2□□□□□ -0.3
PITRM1-201ENST00000224949 TJP2Q9UDY2 1190 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 SLC7A8Q9UHI5 535 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 MAD1L1Q9Y6D9 718 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 MYH9P35579 1960 aaKnown RBP13.2□□□□□ -0.3
PITRM1-201ENST00000224949 H7C0C1 242 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 TOP3BO95985 862 aaKnown RBP13.2□□□□□ -0.3
PITRM1-201ENST00000224949 ITGAVP06756 1048 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 ATP5OP48047 213 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 CNPY1Q3B7I2 92 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 CMPK2Q5EBM0 449 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 TRIM72Q6ZMU5 477 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 ZBTB33Q86T24 672 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 ZNF276Q8N554 614 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 E2F7Q96AV8 911 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 FAF2Q96CS3 445 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 TMX2Q9Y320 296 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 TELO2Q9Y4R8 837 aa13.2□□□□□ -0.3
PITRM1-201ENST00000224949 PMM2O15305 246 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 VNN1O95497 513 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 ASPHQ12797 758 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 CDC16Q13042 620 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 TAF5Q15542 800 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 ZACNQ401N2 412 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 MROH9Q5TGP6 573 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 NMD3Q96D46 503 aaKnown RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 RMDN3Q96TC7 470 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 TRIM56Q9BRZ2 755 aaKnown RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 MSTO1Q9BUK6 570 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 UBE2OQ9C0C9 1292 aaKnown RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 PHACTR1Q9C0D0 580 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 ZNRF3Q9ULT6 936 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 MCF2LO15068 1137 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 RFC1P35251 1148 aaPredicted RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 NCOA4Q13772 614 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 GRAMD1BQ3KR37 738 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 ARHGEF16Q5VV41 709 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 CIAPIN1Q6FI81 312 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 C1orf228Q6PIY5 440 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 PODNQ7Z5L7 613 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 CRLF3Q8IUI8 442 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 APLFQ8IW19 511 aaPredicted RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 C4orf19Q8IY42 314 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 ST13P4Q8IZP2 240 aaPredicted RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 CCDC33Q8N5R6 958 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 SPATA18Q8TC71 538 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 EBF4Q9BQW3 602 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 CENPKQ9BS16 269 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 TIPINQ9BVW5 301 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 TARS2Q9BW92 718 aaKnown RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 TBC1D22BQ9NU19 505 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 DRG1Q9Y295 367 aaKnown RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 SNCAIPQ9Y6H5 919 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 LOC100653049A0A140TA62 436 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 E2F8A0AVK6 867 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 A8MXQ7 604 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 KRT34O76011 436 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 ACO1P21399 889 aaKnown RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 RPS6P62753 249 aaKnown RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 PDCD2Q16342 344 aaPredicted RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 RSPH3Q86UC2 560 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 PHF13Q86YI8 300 aaPredicted RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
PITRM1-201ENST00000224949 MASTLQ96GX5 879 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 NDNQ99608 321 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 PACSIN3Q9UKS6 424 aa13.19□□□□□ -0.3
PITRM1-201ENST00000224949 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 POLRMTO00411 1230 aaKnown RBP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 UGT1A9O60656 530 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 RNASEH1O60930 286 aaKnown RBP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 SORBS2O94875 1100 aaKnown RBP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 MMP8P22894 467 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 HIRAP54198 1017 aaPredicted RBP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 SNRPFP62306 86 aaKnown RBP13.18□□□□□ -0.3
PITRM1-201ENST00000224949 PEX6Q13608 980 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 CDO1Q16878 200 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 NAT8LQ8N9F0 302 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 WWP1Q9H0M0 922 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 VCX3BQ9H321 246 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 OCEL1Q9H607 264 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 PPCSQ9HAB8 311 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 UGT1A7Q9HAW7 530 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 UGT1A10Q9HAW8 530 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 UGT1A8Q9HAW9 530 aa13.18□□□□□ -0.3
PITRM1-201ENST00000224949 VCX3AQ9NNX9 186 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms