RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SMIM22K7EJ46 135 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 MYL2P10916 166 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 MAP2K2P36507 400 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 NFE2Q16621 373 aaPredicted RBP19.18■□□□□ 0.66
CLIP2-201ENST00000223398 ZBTB45Q96K62 511 aaPredicted RBP19.18■□□□□ 0.66
CLIP2-201ENST00000223398 ZCCHC17Q9NP64 241 aaKnown RBP19.18■□□□□ 0.66
CLIP2-201ENST00000223398 HPS4Q9NQG7 708 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 PCDHB5Q9Y5E4 795 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 TRPV2Q9Y5S1 764 aa19.18■□□□□ 0.66
CLIP2-201ENST00000223398 MCF2P10911 925 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 PYGBP11216 843 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 IQSEC1Q6DN90 963 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 PPP1R2P1Q96PQ5 205 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 TEX12Q9BXU0 123 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 PSMC3IPQ9P2W1 217 aaPredicted RBP19.17■□□□□ 0.66
CLIP2-201ENST00000223398 ANGPT2O15123 496 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 GUCY1A3Q02108 690 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 CHADLQ6NUI6 762 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 PLA2G4CQ9UP65 541 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 TMEM131LA2VDJ0 1609 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 C2orf81A6NN90 581 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 NDST1P52848 882 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 OOSP2Q86WS3 158 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 ING2Q9H160 280 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 TCP11X1B4DZS4 312 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 F9P00740 461 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 RRM1P23921 792 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 WASHC5Q12768 1159 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 PACSIN1Q9BY11 444 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 ITGA11Q9UKX5 1188 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 FKBP1AP62942 108 aaKnown RBP19.17■□□□□ 0.66
CLIP2-201ENST00000223398 KDSRQ06136 332 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 BST2Q10589 180 aaKnown RBP19.17■□□□□ 0.66
CLIP2-201ENST00000223398 ITIH5Q86UX2 942 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 TMC2Q8TDI7 906 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 SPATA16Q9BXB7 569 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 AP4E1Q9UPM8 1137 aa19.17■□□□□ 0.66
CLIP2-201ENST00000223398 C5orf58C9J3I9 102 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 EML1O00423 815 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 CTCFP49711 727 aaPredicted RBP19.16■□□□□ 0.66
CLIP2-201ENST00000223398 PTK6Q13882 451 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 TPCN2Q8NHX9 752 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 LACTBL1A8MY62 500 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 UBA1P22314 1058 aaKnown RBP19.16■□□□□ 0.66
CLIP2-201ENST00000223398 STX3Q13277 289 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 MFSD4BQ5TF39 518 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 STAMBPL1Q96FJ0 436 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 TLR8Q9NR97 1041 aaKnown RBP19.16■□□□□ 0.66
CLIP2-201ENST00000223398 PDCD2Q16342 344 aaPredicted RBP19.16■□□□□ 0.66
CLIP2-201ENST00000223398 FKBP1CQ5VVH2 108 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 SH2D3CQ8N5H7 860 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 PNKPQ96T60 521 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 ACADMP11310 421 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 SERPINB9P50453 376 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 KPNA1P52294 538 aaPredicted RBP19.16■□□□□ 0.66
CLIP2-201ENST00000223398 GEMP55040 296 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 TFAP2DQ7Z6R9 452 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 RXFP2Q8WXD0 754 aa19.16■□□□□ 0.66
CLIP2-201ENST00000223398 TGM2P21980 687 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 COILP38432 576 aaPredicted RBP19.15■□□□□ 0.66
CLIP2-201ENST00000223398 HSP90AA5PQ58FG0 334 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 PALB2Q86YC2 1186 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 PPIL6Q8IXY8 311 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 WDR48Q8TAF3 677 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 SYN2Q92777 582 aaPredicted RBP19.15■□□□□ 0.66
CLIP2-201ENST00000223398 FAM163AQ96GL9 167 aaPredicted RBP19.15■□□□□ 0.66
CLIP2-201ENST00000223398 SRP72O76094 671 aaKnown RBP19.15■□□□□ 0.66
CLIP2-201ENST00000223398 OCM2P0CE71 109 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 OCMP0CE72 109 aaPredicted RBP19.15■□□□□ 0.66
CLIP2-201ENST00000223398 NLRP14Q86W24 1093 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 HERC6Q8IVU3 1022 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 SLC5A5Q92911 643 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 GAD1Q99259 594 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 BRD8Q9H0E9 1235 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 KCTD10Q9H3F6 313 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 UBP1Q9NZI7 540 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 AURKCQ9UQB9 309 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 PCDH8O95206 1070 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 SETSIPP0DME0 302 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 PTPN7P35236 360 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 CDH8P55286 799 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 CENPCQ03188 943 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 DDX39BQ13838 428 aaKnown RBP19.15■□□□□ 0.66
CLIP2-201ENST00000223398 GJC2Q5T442 439 aaPredicted RBP19.15■□□□□ 0.66
CLIP2-201ENST00000223398 CELF6Q96J87 481 aaKnown RBP19.15■□□□□ 0.66
CLIP2-201ENST00000223398 CCDC90BQ9GZT6 254 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 NT5MQ9NPB1 228 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 PKD2L2Q9NZM6 624 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 TSPAN16Q9UKR8 245 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 NCF1BA6NI72 391 aaPredicted RBP19.15■□□□□ 0.66
CLIP2-201ENST00000223398 NCF1CA8MVU1 366 aaPredicted RBP19.15■□□□□ 0.66
CLIP2-201ENST00000223398 FBXO21O94952 628 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 LMNAP02545 664 aaKnown RBP19.15■□□□□ 0.66
CLIP2-201ENST00000223398 NCF1P14598 390 aaPredicted RBP19.15■□□□□ 0.66
CLIP2-201ENST00000223398 PEX19P40855 299 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 ADIGQ0VDE8 80 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 SLC39A12Q504Y0 691 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 LINC00523Q86TU6 105 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 TRIML2Q8N7C3 387 aa19.15■□□□□ 0.66
CLIP2-201ENST00000223398 NPHS2Q9NP85 383 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms