RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 SCUBE2Q9NQ36 999 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 MUTP22033 750 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 SERPINB8P50452 374 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 ZNF177Q13360 481 aaPredicted RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 VPS72Q15906 364 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 KDM7AQ6ZMT4 941 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 CCDC60Q8IWA6 550 aaPredicted RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 BBS7Q8IWZ6 715 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 PPP2R3CQ969Q6 453 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 FRMD8P1Q9BZ68 369 aaPredicted RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 IARS2Q9NSE4 1012 aaKnown RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 C2orf81A6NN90 581 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 GLRA3O75311 464 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 LRG1P02750 347 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 APOA4P06727 396 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 CYP2C8P10632 490 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 MLNP12872 115 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 ARHGAP15Q53QZ3 475 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 GNASQ5JWF2 1037 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 CBWD2Q8IUF1 395 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 VPS37AQ8NEZ2 397 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 ZKSCAN4Q969J2 545 aaPredicted RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 ILKAPQ9H0C8 392 aaPredicted RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 TBC1D23Q9NUY8 699 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 EIF3LQ9Y262 564 aaKnown RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 GALNTL6Q49A17 601 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 SDE2Q6IQ49 451 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 ENGASEQ8NFI3 743 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 DIS3LQ8TF46 1054 aaKnown RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 PRPF18Q99633 342 aaKnown RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 CAPN10Q9HC96 672 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 PRG3Q9Y2Y8 225 aaPredicted RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 STX7O15400 261 aaKnown RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 THPOP40225 353 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 PLIN5Q00G26 463 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 NUDT12Q9BQG2 462 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 GPATCH2LQ9NWQ4 482 aa18.51■□□□□ 0.55
EXTL3-201ENST00000220562 C6orf203Q9P0P8 240 aaPredicted RBP18.51■□□□□ 0.55
EXTL3-201ENST00000220562 EPB42P16452 691 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 STIP1P31948 543 aaKnown RBP18.5■□□□□ 0.55
EXTL3-201ENST00000220562 RUNX1T1Q06455 604 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 ARMC6Q6NXE6 501 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 POP1Q99575 1024 aaKnown RBP18.5■□□□□ 0.55
EXTL3-201ENST00000220562 TFDP3Q5H9I0 405 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 MAGEB18Q96M61 343 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 FRMD8Q9BZ67 464 aaPredicted RBP18.5■□□□□ 0.55
EXTL3-201ENST00000220562 RPS6KL1Q9Y6S9 549 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 DSG1Q02413 1049 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 CARD9Q9H257 536 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 SYTL2Q9HCH5 934 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 USP1O94782 785 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 NYAP1Q6ZVC0 841 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 USE1Q9NZ43 259 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 DUSP10Q9Y6W6 482 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 A0A087X0T9 212 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 FAM228BP0C875 321 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 CYP11B1P15538 503 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 VHLP40337 213 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 SLC11A2P49281 568 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 NUMBP49757 651 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 TBL3Q12788 808 aaKnown RBP18.5■□□□□ 0.55
EXTL3-201ENST00000220562 P3H2Q8IVL5 708 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 HEY2Q9UBP5 337 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 APPL1Q9UKG1 709 aa18.5■□□□□ 0.55
EXTL3-201ENST00000220562 CAPZA2P47755 286 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 NME5P56597 212 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 RPRD1AQ96P16 312 aaPredicted RBP18.49■□□□□ 0.55
EXTL3-201ENST00000220562 THUMPD3Q9BV44 507 aaKnown RBP18.49■□□□□ 0.55
EXTL3-201ENST00000220562 NMRK2Q9NPI5 230 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 M0R3G1 203 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 SUPT7LO94864 414 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 ALBP02768 609 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 CLK1P49759 484 aaKnown RBP18.49■□□□□ 0.55
EXTL3-201ENST00000220562 TP53BP2Q13625 1128 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 CACHD1Q5VU97 1274 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 MPZL3Q6UWV2 235 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 AAR2Q9Y312 384 aaKnown RBP18.49■□□□□ 0.55
EXTL3-201ENST00000220562 C1orf167Q5SNV9 1468 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 E9PCH4 1651 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 ENO4A6NNW6 628 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 F5H5T6 163 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 OTOAQ7RTW8 1153 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 PNMA8BQ9ULN7 279 aaPredicted RBP18.49■□□□□ 0.55
EXTL3-201ENST00000220562 CAMSAP1Q5T5Y3 1602 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 GAS2O43903 313 aaKnown RBP18.49■□□□□ 0.55
EXTL3-201ENST00000220562 VTNP04004 478 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 ARP10275 920 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 VDRP11473 427 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 PSMA4P25789 261 aaKnown RBP18.49■□□□□ 0.55
EXTL3-201ENST00000220562 TTC33Q6PID6 262 aaPredicted RBP18.49■□□□□ 0.55
EXTL3-201ENST00000220562 BATF3Q9NR55 127 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 VPS9D1Q9Y2B5 631 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 CAB39Q9Y376 341 aaPredicted RBP18.49■□□□□ 0.55
EXTL3-201ENST00000220562 NAMPTP43490 491 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 GIT2Q14161 759 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 MTIF3Q9H2K0 278 aaKnown RBP18.49■□□□□ 0.55
EXTL3-201ENST00000220562 FBXO28Q9NVF7 368 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 WHRNQ9P202 907 aa18.49■□□□□ 0.55
EXTL3-201ENST00000220562 SLC2A3P11169 496 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms