RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 C2CD2Q9Y426 696 aa9.36□□□□□ -0.91
MTHFD1-201ENST00000216605 LRRC37A2A6NM11 1700 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 MYADML2A6NDP7 307 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 CA12O43570 354 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 PHF2O75151 1096 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 GPR32O75388 356 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 LSM8O95777 96 aaKnown RBP9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 CTNNA2P26232 953 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 HOXA11P31270 313 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 CHRNA3P32297 505 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 HSPA9P38646 679 aaKnown RBP9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 RGS7P49802 495 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 RAD23BP54727 409 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 IFFO1Q0D2I5 559 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 SLC30A9Q6PML9 568 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 TMEM110Q86TL2 294 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 ACOT1Q86TX2 421 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 PARP9Q8IXQ6 854 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 TMEM40Q8WWA1 233 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 ATG4AQ8WYN0 398 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 P3H4Q92791 437 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 NT5C1AQ9BXI3 368 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 ELOVL4Q9GZR5 314 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 FAM114A2Q9NRY5 505 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 HESX1Q9UBX0 185 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 GJD2Q9UKL4 321 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 STRIP2Q9ULQ0 834 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 COMMD10Q9Y6G5 202 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 LRRD1A4D1F6 860 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 A8MXQ7 604 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 XPOTO43592 962 aaKnown RBP9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 KRT38O76015 456 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 RARAP10276 462 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 ZNF16P17020 682 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 SLC8A1P32418 973 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 PPARDQ03181 441 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 ATP13A4Q4VNC1 1196 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 JAMLQ86YT9 394 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 EMC1Q8N766 993 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 C12orf29Q8N999 325 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 MAGEC3Q8TD91 643 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 DHRS1Q96LJ7 313 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 ZNF518BQ9C0D4 1074 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 CXCL16Q9H2A7 254 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 PCSK1NQ9UHG2 260 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 CNTN6Q9UQ52 1028 aa9.35□□□□□ -0.91
MTHFD1-201ENST00000216605 TMEM88BA6NKF7 163 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 F8VP50 259 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 O00370 1275 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 DUSP11O75319 330 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 GRAP2O75791 330 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 MICAL2O94851 1124 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 FESP07332 822 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 RALAP11233 206 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 ELNP15502 786 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 ZNF132P52740 706 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 TAS2R40P59535 323 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 PURAQ00577 322 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 PRKCZQ05513 592 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 CALCOCO2Q13137 446 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 HIC1Q14526 733 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 FAM102AQ5T9C2 384 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 CACNA2D3Q8IZS8 1091 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 PRELID2Q8N945 189 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 SLC4A11Q8NBS3 891 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 MAIP1Q8WWC4 291 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 HAUS1Q96CS2 278 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 MTG1Q9BT17 334 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 SNX25Q9H3E2 840 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 CYP3A43Q9HB55 503 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 GOLGA2P5Q9HBQ8 144 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 METTL5Q9NRN9 209 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 TJP2Q9UDY2 1190 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 TTC7AQ9ULT0 858 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 BARX2Q9UMQ3 279 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 ATP8A1Q9Y2Q0 1164 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 TLL2Q9Y6L7 1015 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 PPEF2O14830 753 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 ZNF189O75820 626 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 RNF8O76064 485 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 PAEPP09466 180 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 VDRP11473 427 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 HOXD8P13378 290 aaPredicted RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 DYNLT1P63172 113 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 DHX9Q08211 1270 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 TRIM32Q13049 653 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 DHX34Q14147 1143 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 CDO1Q16878 200 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 SMTNL2Q2TAL5 461 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 PTPN20Q4JDL3 420 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 PLEKHA7Q6IQ23 1121 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 CYB5D1Q6P9G0 228 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 FUKQ8N0W3 1084 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 MAB21L3Q8N8X9 362 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 TRIB2Q92519 343 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 ZMAT2Q96NC0 199 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 FMO2Q99518 471 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 XPNPEP3Q9NQH7 507 aa9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 DDX20Q9UHI6 824 aaKnown RBP9.34□□□□□ -0.91
MTHFD1-201ENST00000216605 PASKQ96RG2 1323 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms