RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Tmem120aQ8C1E7 343 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Fbxl5Q8C2S5 690 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Zfp446Q8C9M8 523 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Unc93b1Q8VCW4 598 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Tpgs1Q99MS8 303 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Ccdc124Q9D8X2 217 aaKnown RBP16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Trim54Q9ERP3 366 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Apold1E9Q0X2 246 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Fgf15O35622 218 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Klc1O88447 541 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Fcer2P20693 331 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Pou3f3P31361 497 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Igsf9Q05BQ1 1179 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Elf1Q60775 612 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Scube3Q66PY1 993 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 LnpkQ7TQ95 425 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Kctd12bQ8C7J6 292 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Cd300ldQ8VCH2 221 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 GarsQ9CZD3 729 aaKnown RBP16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Krt16Q9Z2K1 469 aa16.64■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gm281D3Z1Y0 860 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gm4788E9Q8B5 879 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Speer2E9Q9U2 264 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Dpep1P31428 410 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Wdr44Q6NVE8 915 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Tdpoz4Q6YCH2 370 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Znf598Q80YR4 908 aaKnown RBP16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 AarsQ8BGQ7 968 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Fbxw21Q8BI38 468 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Unc45bQ8CGY6 931 aaKnown RBP16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Pqbp1Q91VJ5 263 aaKnown RBP16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Cdk5rap3Q99LM2 503 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 AvenQ9D9K3 342 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gm6657A0A1B0GRJ3 277 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 D3Z070 196 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gm3252E9PUT9 216 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gm3468E9QAJ8 216 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Atf2P16951 487 aaKnown RBP16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 AmphQ7TQF7 686 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Wnk4Q80UE6 1222 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Ago3Q8CJF9 860 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Snf8Q9CZ28 258 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Acbd6Q9D061 282 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Smok2bQ9QYZ3 484 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Smok2aQ9QYZ6 504 aa16.63■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gpr161B2RPY5 545 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Rfx8D3YU81 596 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Tex11Q14AT2 947 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Tmem45aQ60774 273 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Cd300aQ6SJQ0 318 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Baiap3Q80TT2 1134 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Sh3rf3Q8C120 878 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Kat14Q8CID0 779 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Fuca1Q99LJ1 452 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Ssxb9A2BI93 185 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Krt28A6BLY7 462 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Ercc5P35689 1170 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 TktP40142 623 aaKnown RBP16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Adcy8P97490 1249 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Dzip1lQ499E4 774 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Papss1Q60967 624 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Txndc8Q69AB2 127 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Skiv2lQ6NZR5 1244 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Daam2Q80U19 1115 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Daam1Q8BPM0 1077 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 OafQ8QZR4 282 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Ace2Q8R0I0 805 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Kdelr1Q99JH8 212 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 TfgQ9Z1A1 397 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Olfr1354E9Q5G9 310 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 AlpiF8VPQ6 554 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Zfp715G3X9T1 886 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Art2aP17981 287 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Msh2P43247 935 aaKnown RBP16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Znf185Q62394 352 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Olfr1105Q7TR58 312 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Dmtf1Q8CE22 761 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Slc26a7Q8R2Z3 656 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 MiosQ8VE19 875 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Pcdha3Q91Y16 942 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Wfdc1Q9ESH5 211 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Doc2gQ9ESN1 387 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Col5a3Q9JLI2 1739 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Casp8ap2Q9WUF3 1962 aa16.62■□□□□ 0.25
Trim39-203ENSMUST00000113706 Cntnap4Q99P47 1310 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 F6Y6L6 278 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Per2O54943 1257 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Vav1P27870 845 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Fbxw10Q5SUS0 1030 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gga2Q6P5E6 603 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Patl2A2ARM1 529 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gm6133B2RY53 190 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Uchl4P58321 233 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 SbdsP70122 250 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 PostnQ62009 838 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Cd300lfQ6SJQ7 337 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Olfr1046Q7TR79 316 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Anapc5Q8BTZ4 740 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Hectd2Q8CDU6 774 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Uroc1Q8VC12 676 aa16.61■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 70.8 ms