RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Crybg3Q80W49 1005 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 TufmQ8BFR5 452 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Samm50Q8BGH2 469 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Spata16Q8C636 571 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Sulf1Q8K007 870 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Edc3Q8K2D3 508 aaKnown RBP9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Wasf1Q8R5H6 559 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 NclnQ8VCM8 563 aaKnown RBP9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mlc1Q8VHK5 382 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Trex1Q91XB0 314 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Rxfp2Q91ZZ5 737 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Smtnl1Q99LM3 459 aa9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Trim2Q9ESN6 744 aaKnown RBP9.53□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Ptpn23Q6PB44 1692 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Olfr1032A2ATE5 310 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gcom1E9PZ54 550 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Sult3a2G5E904 293 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm3248K7N721 186 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 ShdO88834 343 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Slc2a7P0C6A1 513 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Hspa1bP17879 642 aaKnown RBP9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Pou5f1P20263 352 aaKnown RBP9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cd86P42082 309 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 PltpP55065 493 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 PrkacbP68181 351 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 PgrQ00175 926 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Zscan10Q3URR7 782 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Hspa1aQ61696 641 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ddx51Q6P9R1 639 aaKnown RBP9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ints6Q6PCM2 883 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 E2f7Q6S7F2 904 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cd300lfQ6SJQ7 337 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Svs1Q6WIZ7 820 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm5346Q7M766 736 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Kcnf1Q7TSH7 493 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tcp11l1Q8BTG3 509 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tmem62Q8BXJ9 643 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 DpydQ8CHR6 1025 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Tmem60Q8K174 133 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Mapre2Q8R001 326 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Taf11Q99JX1 211 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Bcs1lQ9CZP5 418 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Pbld1Q9DCG6 288 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cog8Q9JJA2 640 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Syt10Q9R0N4 523 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Fut8Q9WTS2 575 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gja10Q9WUS4 505 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gipc1Q9Z0G0 333 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Atp12aQ9Z1W8 1035 aa9.52□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm6121L7MUF1 212 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Sh2b3O09039 548 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cdk2ap1O35207 114 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Lrrc6O88978 473 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rad23aP54726 363 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Samsn1P57725 372 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 4930430A15RikQ05AC5 485 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Agbl4Q09LZ8 540 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Mcm10Q0VBD2 885 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 InscQ3HNM7 579 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ccndbp1Q3TVC7 356 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rnf10Q3UIW5 804 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 AsnsQ61024 561 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Nlrp9aQ66X03 949 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Peg10Q7TN75 958 aaKnown RBP9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cpped1Q8BFS6 312 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Clca2Q8BG22 942 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Atat1Q8K341 421 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Vps18Q8R307 973 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ces2cQ91WG0 561 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Brms1Q99N20 246 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Cul5Q9D5V5 780 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Abcg8Q9DBM0 673 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Swt1Q9DBQ9 907 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gpr63Q9EQQ3 425 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Foxo1Q9R1E0 652 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 TfebQ9R210 475 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Msl3Q9WVG9 525 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 VirmaA2AIV2 1811 aaKnown RBP9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Zfp993A2A8V4 313 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Zfp992B1ASD8 573 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Zfp114B2RRA8 586 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Nova2D3YVV7 556 aaKnown RBP9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Kcnt2D3Z649 1135 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Trim30dE9PWL0 497 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 E230025N22RikG5E8S3 482 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm21972J3QN38 98 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gm21962L7N280 338 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 CtsaP16675 474 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Mmp12P34960 473 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Gli1P47806 1111 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Emilin3P59900 758 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Rps26P62855 115 aaKnown RBP9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Stim1P70302 685 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 SgcaP82350 387 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Evi5P97366 809 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 BmxP97504 651 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Xlr4cQ3TKR2 215 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Arhgap44Q5SSM3 814 aa9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Ranbp10Q6VN19 620 aaKnown RBP9.51□□□□□ -0.89
Upf3b-201ENSMUST00000076265 Zswim5Q80TC6 1188 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms