RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Uba3Q8C878 462 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Kat14Q8CID0 779 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Stau2Q8CJ67 570 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Znf467Q8JZL0 594 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rabep2Q91WG2 554 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 YarsQ91WQ3 528 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Akr1c14Q91WT7 323 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 SncaipQ99ME3 962 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ino80bQ99PT3 375 aaKnown RBP10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rpa3Q9CQ71 121 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rmi1Q9D4G9 616 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tomm20lQ9D4V6 152 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Slc26a3Q9WVC8 757 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Atp6v1c1Q9Z1G3 382 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Mbd1Q9Z2E2 636 aa10.23□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gm29554A0A087WNW4 188 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Nek2O35942 443 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Vav1P27870 845 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Sh3bp2Q06649 559 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Lrrn4clQ3TYX2 239 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Smcr8Q3UMB5 935 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Kctd8Q50H33 476 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Xlr3cQ61806 226 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Atp4aQ64436 1033 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rbl2Q64700 1135 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 NostrinQ6WKZ7 506 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Acap2Q6ZQK5 770 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Lsm8Q6ZWM4 96 aaKnown RBP10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Fam102aQ78T81 392 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Zfp454Q80Y34 536 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Znf598Q80YR4 908 aaKnown RBP10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 GlmnQ8BZM1 596 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Hdac7Q8C2B3 938 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Trip10Q8CJ53 603 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Abhd8Q8R0P8 439 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Znf426Q8R1D1 550 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ccdc80Q8R2G6 949 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gins2Q9D600 185 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 B4galt5Q9JMK0 388 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gm12394A2AKP6 982 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 C130060K24RikG3UWA8 416 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 SftpdP50404 374 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Stmn2P55821 179 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rgl2Q61193 778 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Hsph1Q61699 858 aaKnown RBP10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ptk6Q64434 451 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Znf12Q7TSI0 686 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Arhgap24Q8C4V1 747 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Cog3Q8CI04 820 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Mcoln2Q8K595 566 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Stx18Q8VDS8 334 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gbp7Q91Z40 638 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 TfQ921I1 697 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Slc12a9Q99MR3 914 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Sgf29Q9DA08 293 aaKnown RBP10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tm9sf1Q9DBU0 606 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Igdcc4Q9EQS9 1252 aa10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 SktA2AQ25 1946 aaKnown RBP10.22□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Fam155bA2BDP1 471 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Vmn2r39L7N2E5 861 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Stmn1P54227 149 aaKnown RBP10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Q3UE31 404 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Spag6Q3V0U9 509 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ampd1Q3V1D3 745 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Trim24Q64127 1051 aaKnown RBP10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tmcc1Q69ZZ6 649 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Mapk4Q6P5G0 583 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rimbp2Q80U40 1072 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 6820408C15RikQ8BJX2 354 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Gpr150Q8BL07 427 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ccdc159Q8C963 411 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Rilpl2Q99LE1 197 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Txndc12Q9CQU0 170 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tmco5aQ9D9D5 303 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Piwil1Q9JMB7 862 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Psme4Q5SSW2 1843 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Atp8b4A2ANX3 1194 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Has3O08650 554 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 DldO08749 509 aaKnown RBP10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Prom1O54990 867 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 MafbP54841 323 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Cyth2P63034 400 aaKnown RBP10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Kcna2P63141 499 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 PrkcbP68404 671 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tmem63bQ3TWI9 832 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Prkaa1Q5EG47 559 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Ugt1a1Q63886 535 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Senp7Q8BUH8 1037 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Polr2bQ8CFI7 1174 aaKnown RBP10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 CmasQ99KK2 432 aaKnown RBP10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Mrpl4Q9DCU6 294 aaKnown RBP10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Tk2Q9R088 270 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Capn7Q9R1S8 813 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Speer3W4VSP1 261 aa10.21□□□□□ -0.77
Ccdc40-202ENSMUST00000053440 Lilra5D3Z7A9 295 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Cyp2t4E9PWV0 503 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Dnase1l3O55070 310 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 CidebO70303 219 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Ass1P16460 412 aa10.21□□□□□ -0.78
Ccdc40-202ENSMUST00000053440 Mov10P23249 1004 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms