RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Nr1h3Q9Z0Y9 445 aa19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 SktA2AQ25 1946 aaKnown RBP19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Ankfn1A0A140LIW7 1083 aa19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Gm4846B2RWH8 538 aa19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Galnt4O08832 578 aa19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Hoxb8P09632 243 aa19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Rbp3P49194 1234 aa19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Eif3eP60229 445 aaKnown RBP19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 RalgdsQ03385 852 aa19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Zfp953Q3UPV7 304 aa19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Lgr6Q3UVD5 967 aa19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Ino80dQ66JY2 873 aaKnown RBP19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Arhgap20Q6IFT4 1182 aa19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Chmp2bQ8BJF9 213 aa19.88■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Gm20509G3UZF1 325 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Ift81O35594 676 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Ppef1O35655 650 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 MafgO54790 162 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Elk3P41971 409 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Bace1P56818 501 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Lhx5P61375 402 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Mphosph8Q3TYA6 858 aaKnown RBP19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Oog3Q3UWY1 500 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Ubxn7Q6P5G6 467 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Wdtc1Q80ZK9 677 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Gbp9Q8BTS3 619 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Ttc39bQ8BYY4 617 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Atg16l1Q8C0J2 607 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Tasp1Q8R1G1 420 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Lman1lQ8VCD3 505 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Spats2lQ91WJ7 558 aaKnown RBP19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Dpp3Q99KK7 738 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Decr1Q9CQ62 335 aaKnown RBP19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Med7Q9CZB6 233 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Toe1Q9D2E2 511 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Pck1Q9Z2V4 622 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Zgrf1Q0VGT4 1863 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Ssxb9A2BI93 185 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Smok3aC0HKC8 504 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Smok3bC0HKC9 504 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Oog1E9Q5G7 496 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 F6Y6L6 278 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 LeprP48356 1162 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Npas2P97460 816 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Q3UE31 404 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 FaxcQ3UMF9 409 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Cacna2d2Q6PHS9 1154 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Tas2r109Q7M707 316 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Pofut2Q8VHI3 429 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Spns2Q91VM4 549 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Hkdc1Q91W97 915 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Rpa3Q9CQ71 121 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Q9D1Z2 194 aa19.87■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Tcp11x2A2AEI7 503 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Arhgef10lA2AWP8 1280 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 S100a5P63084 93 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Tab3Q571K4 716 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Cage1Q5IR70 849 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 PterQ60866 349 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 PapolaQ61183 739 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Tpp2Q64514 1262 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Rbl2Q64700 1135 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Bnip1Q6QD59 228 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Rbbp5Q8BX09 538 aaKnown RBP19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Arhgap29Q8CGF1 1266 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 PygbQ8CI94 843 aaKnown RBP19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 DnerQ8JZM4 737 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Mgat5Q8R4G6 740 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 PlvapQ91VC4 438 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 MutyhQ99P21 515 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Sapcd2Q9D818 391 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 SerhlQ9EPB5 311 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Taf1Q80UV9 1891 aa19.86■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Fam71e2L7N480 754 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Rap1gap2Q5SVL6 712 aaKnown RBP19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Ankrd6Q69ZU8 712 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Tubgcp5Q8BKN5 1024 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Slc7a14Q8BXR1 771 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Lrrc19Q8BZT5 364 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Smtnl2Q8CI12 456 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Rec114Q9CWH4 259 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 ItgavP43406 1044 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 YwhagP61982 247 aaKnown RBP19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Irf6P97431 467 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Sox10Q04888 466 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Sh3bp2Q06649 559 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Fam91a1Q3UVG3 837 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Capn11Q6J756 714 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Olfr299Q7TS05 330 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Nipal4Q8BZF2 406 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Castor1Q9CWQ8 331 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Trpc3Q9QZC1 836 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 HnrnpcQ9Z204 313 aaKnown RBP19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Trip11E9Q512 1976 aa19.85■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Gm10801F7C7Q0 168 aa19.84■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 DffaO54786 331 aa19.84■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 UmpsP13439 481 aaKnown RBP19.84■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 MafbP54841 323 aa19.84■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Pla2g6P97819 807 aa19.84■□□□□ 0.77
Ccdc50-201ENSMUST00000039443 Zscan2Q07230 614 aa19.84■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms