RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Smok3aC0HKC8 504 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Smok3bC0HKC9 504 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pole2O54956 527 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Capn13Q3UW68 665 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mfn1Q811U4 741 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Eme1Q8BJW7 570 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 D630039A03RikQ8K0M7 236 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Dppa3Q8QZY3 150 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Slc35c2Q8VCX2 364 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 PgdQ9DCD0 483 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Trpm5Q9JJH7 1158 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ifi202Q9R002 445 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm8267E9Q207 261 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Adam7O35227 789 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ezh1P70351 747 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Sv2cQ69ZS6 727 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Olfr297Q7TS07 310 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Snx17Q8BVL3 470 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 WdpcpQ8C456 722 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Parp9Q8CAS9 866 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Exd2Q8VEG4 650 aaKnown RBP10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Klhl28Q9CR40 571 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Abca9Q8K449 1623 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Phf11A6H5X4 337 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 A430078G23RikE9Q7Y4 484 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Akap1O08715 857 aaKnown RBP10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Hmox2O70252 315 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Smyd1P97443 490 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 FcgrtQ61559 365 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Prrg3Q6PAQ9 231 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Sash3Q8K352 380 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 CoprsQ9CQ13 173 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mup10A2BIN1 180 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mup14A2CEK7 180 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mup19A9C497 187 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mup15A9R9W0 180 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mup17B5X0G2 180 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mup8E9PVW0 235 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zfp788E9Q980 884 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mup7E9QA79 235 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mup6P02762 180 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mup1P11588 180 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mup2P11589 180 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Prim2P33610 505 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 CstaP56567 97 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rnf113a2Q14B01 337 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Aars2Q14CH7 980 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rnf139Q7TMV1 668 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Raver2Q7TPD6 673 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Camta2Q80Y50 1208 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 BC048507Q80ZS7 89 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Spata21Q8BHW6 681 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Sh3glb1Q9JK48 365 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ror1Q9Z139 937 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rhox3fA2ANE1 215 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Vmn2r77L7N2B7 854 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tnfrsf11bO08712 401 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 CrymO54983 313 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Snx3O70492 162 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ap2a2P17427 938 aaKnown RBP10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Serpina5P70458 405 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Slc9c1Q6UJY2 1175 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ubap1Q8BH48 502 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Man2a2Q8BRK9 1152 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Arhgap25Q8BYW1 648 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pphln1Q8K2H1 381 aaKnown RBP10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Guca1bQ8VBV8 201 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Anxa13Q99JG3 317 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Serbp1Q9CY58 407 aaKnown RBP10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gtf2h1Q9DBA9 547 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Nup50Q9JIH2 466 aaKnown RBP10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pik3r2O08908 722 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Lire1P11260 357 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ifi44Q8BV66 422 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ces1fQ91WU0 561 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tnfaip8Q921Z5 198 aa10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 AenQ9CZI9 336 aaKnown RBP10.5□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Cyp2d10P24456 504 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 SarsP26638 512 aaKnown RBP10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Kansl1lQ5DTI6 991 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 CrkQ64010 304 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tbc1d12Q6A039 696 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Samd4bQ80XS6 687 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ldlrap1Q8C142 308 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rex1bdQ9CYZ6 169 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tlr5Q9JLF7 859 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Kcnd2Q9Z0V2 630 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Robo2Q7TPD3 1470 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm28168A0A087WNP1 180 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zyg11aA2BFL2 627 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pold2O35654 469 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Atp6v1e1P50518 226 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Antxr2Q6DFX2 487 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Atg9bQ6EBV9 922 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Xpo1Q6P5F9 1071 aaKnown RBP10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rsbn1Q80T69 795 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Camk1dQ8BW96 385 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Sh3kbp1Q8R550 709 aaKnown RBP10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rec114Q9CWH4 259 aa10.49□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tmem68Q9D850 329 aa10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms