RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Fam71aB7XG49 585 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gm5689F6Y2A6 97 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 TyrobpO54885 114 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Map3k7clP58500 142 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Eif3eP60229 445 aaKnown RBP11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tmem63bQ3TWI9 832 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Grik4Q8BMF5 956 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Olfr1352Q8VGX5 309 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 NonoQ99K48 473 aaKnown RBP11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ska2Q9CR46 120 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Snf8Q9CZ28 258 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Spata1Q9D5R4 444 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Dcaf6Q9DC22 876 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 EtfbQ9DCW4 255 aaKnown RBP11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Plod3Q9R0E1 741 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Unc13dB2RUP2 1085 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Usp35M0QWN7 1009 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Slc27a2O35488 620 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ptpn20O55082 426 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cd70O55237 195 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 FechP22315 420 aaKnown RBP11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Marcksl1P28667 200 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Aars2Q14CH7 980 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Atxn7l3bQ3UD01 97 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Nt5c2Q3V1L4 560 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Nr2c1Q505F1 590 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Adgre1Q61549 931 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ptpn14Q62130 1189 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Dclk2Q6PGN3 756 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Olfr23Q7TRX4 325 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 AgpsQ8C0I1 645 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 CenpuQ8C4M7 410 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 PpatQ8CIH9 517 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Prmt7Q922X9 692 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Slc39a3Q99K24 317 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rnf181Q9CY62 165 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 AuhQ9JLZ3 314 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Vmn2r77L7N2B7 854 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Serpini1O35684 410 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Camk4P08414 469 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 NrlP54846 237 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Kpnb1P70168 876 aaKnown RBP11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Togaram2Q3TYG6 1002 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Mfhas1Q3V1N1 1048 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Pdp2Q504M2 532 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Etaa1Q5SVT3 877 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Nuak1Q641K5 658 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Pnma2Q8BHK0 365 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Fra10ac1Q8BP78 315 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rfx6Q8C7R7 927 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 GldcQ91W43 1025 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Asb11Q9CQ31 323 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Pcyox1Q9CQF9 505 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Thumpd2Q9CZB3 528 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 GOLGA7BQ9D428 167 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Eef1akmt2Q9D853 244 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Olfr711Q9EPG2 314 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 EmcnQ9R0H2 261 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ambra1A2AH22 1300 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Golga4Q91VW5 2238 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Olfr391-psA0A0U1RNJ4 312 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 AunipE9Q6Z5 340 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 HpseQ6YGZ1 535 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tas2r109Q7M707 316 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zbtb5Q7TQG0 670 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Olfr389Q7TRX7 312 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ifi205aQ8CGE8 404 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ppp4r1Q8K2V1 951 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 HscbQ8K3A0 234 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Sec14l2Q99J08 403 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Kat2aQ9JHD2 830 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Arl10Q9QXJ4 243 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Duox1A2AQ92 1551 aa11.32□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tp53P02340 387 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Psma2P49722 234 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Nub1P54729 614 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Mief2Q5NCS9 454 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Styk1Q6J9G1 429 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Inpp4bQ6P1Y8 924 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Parp6Q6P6P7 630 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ddx55Q6ZPL9 600 aaKnown RBP11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Vgll2Q8BGW8 322 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Daam1Q8BPM0 1077 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ccdc28bQ8CEG5 200 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Sik2Q8CFH6 931 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Sgsm3Q8VCZ6 750 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 GhdcQ99J23 532 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tomm20lQ9D4V6 152 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tspan17Q9D7W4 270 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 ParvaQ9EPC1 372 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Trpv2Q9WTR1 756 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Myh10Q61879 1976 aaKnown RBP11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gm6133B2RY53 190 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Magea4F2Z493 315 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 CenpaO35216 134 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 RarbP22605 482 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Rab6bP61294 208 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 FerP70451 823 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Msantd2Q6NZR2 559 aa11.31□□□□□ -0.6
Msh3-201ENSMUST00000022220 Zfp512bQ6PHP4 879 aa11.31□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms