RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W PAM16P42949 149 aa1.74□□□□□ -2.13
HSH49YOR319W RPS22BQ3E7Y3 130 aaKnown RBP1.74□□□□□ -2.13
HSH49YOR319W HFA1P32874 2273 aa1.73□□□□□ -2.13
HSH49YOR319W ROM2P51862 1356 aaKnown RBP1.72□□□□□ -2.13
HSH49YOR319W YLR194CQ05777 254 aa1.72□□□□□ -2.13
HSH49YOR319W YPL261CQ08976 102 aa1.72□□□□□ -2.13
HSH49YOR319W TY4B-JP47024 1803 aa1.71□□□□□ -2.14
HSH49YOR319W YSF3P0C074 85 aaPredicted RBP1.71□□□□□ -2.14
HSH49YOR319W YJL197C-AP0C5P0 93 aa1.71□□□□□ -2.14
HSH49YOR319W YHR130CP38834 111 aa1.71□□□□□ -2.14
HSH49YOR319W YIL014C-AQ02598 104 aa1.71□□□□□ -2.14
HSH49YOR319W MGR2Q02889 113 aa1.71□□□□□ -2.14
HSH49YOR319W EMP24P32803 203 aaKnown RBP1.7□□□□□ -2.14
HSH49YOR319W LHP1P33399 275 aaKnown RBP1.7□□□□□ -2.14
HSH49YOR319W YER137CP40083 148 aaKnown RBP1.7□□□□□ -2.14
HSH49YOR319W PAU12P53343 120 aa1.7□□□□□ -2.14
HSH49YOR319W OST5Q92316 86 aa1.7□□□□□ -2.14
HSH49YOR319W YER039C-AP0CD97 72 aa1.69□□□□□ -2.14
HSH49YOR319W COA6Q3E846 104 aa1.69□□□□□ -2.14
HSH49YOR319W YBR013CP38215 129 aa1.68□□□□□ -2.14
HSH49YOR319W YER187WP40102 141 aa1.68□□□□□ -2.14
HSH49YOR319W YIL163CP40448 117 aa1.68□□□□□ -2.14
HSH49YOR319W RPL37AP49166 88 aaKnown RBP1.68□□□□□ -2.14
HSH49YOR319W MIC27P50945 234 aa1.68□□□□□ -2.14
HSH49YOR319W DAD1Q12248 94 aa1.68□□□□□ -2.14
HSH49YOR319W YRF1-3P0CX14 1859 aa1.68□□□□□ -2.14
HSH49YOR319W YRF1-7P0CX15 1859 aa1.68□□□□□ -2.14
HSH49YOR319W PCC1Q3E833 88 aa1.67□□□□□ -2.14
HSH49YOR319W YLR365WQ7LIF2 110 aa1.67□□□□□ -2.14
HSH49YOR319W RPL22AP05749 121 aaKnown RBP1.66□□□□□ -2.14
HSH49YOR319W SRX1P36077 127 aa1.66□□□□□ -2.14
HSH49YOR319W HHY1P39982 102 aa1.66□□□□□ -2.14
HSH49YOR319W MVB12P42939 101 aa1.66□□□□□ -2.14
HSH49YOR319W YHR213W-BQ8TGK1 99 aa1.66□□□□□ -2.14
HSH49YOR319W RGI1P40043 161 aaPredicted RBP1.65□□□□□ -2.15
HSH49YOR319W GTT1P40582 234 aa1.65□□□□□ -2.15
HSH49YOR319W SNN1P48232 102 aa1.65□□□□□ -2.15
HSH49YOR319W RPS12P48589 143 aaKnown RBP1.65□□□□□ -2.15
HSH49YOR319W RPL22BP56628 122 aaKnown RBP1.65□□□□□ -2.15
HSH49YOR319W FIT3Q08907 204 aa1.65□□□□□ -2.15
HSH49YOR319W ENV10Q99382 181 aa1.65□□□□□ -2.15
HSH49YOR319W DNA2P38859 1522 aa1.65□□□□□ -2.15
HSH49YOR319W POR2P40478 281 aa1.64□□□□□ -2.15
HSH49YOR319W COX23P38824 151 aa1.63□□□□□ -2.15
HSH49YOR319W CYB5P40312 120 aa1.63□□□□□ -2.15
HSH49YOR319W MRPL31P14063 131 aaPredicted RBP1.62□□□□□ -2.15
HSH49YOR319W PAU2P32612 120 aa1.62□□□□□ -2.15
HSH49YOR319W GNA1P43577 159 aaPredicted RBP1.62□□□□□ -2.15
HSH49YOR319W YGR164WP53291 111 aa1.62□□□□□ -2.15
HSH49YOR319W HUG1Q6Q5K6 68 aa1.62□□□□□ -2.15
HSH49YOR319W TSC11P40061 1430 aa1.61□□□□□ -2.15
HSH49YOR319W OCA6Q12454 224 aa1.61□□□□□ -2.15
HSH49YOR319W YLR363W-AQ3E747 85 aa1.61□□□□□ -2.15
HSH49YOR319W YGL041C-BQ3E750 60 aa1.61□□□□□ -2.15
HSH49YOR319W YLR285C-AQ3E771 56 aa1.61□□□□□ -2.15
HSH49YOR319W TY1B-HO13535 1793 aa1.61□□□□□ -2.15
HSH49YOR319W PAU19P0CE85 124 aa1.6□□□□□ -2.15
HSH49YOR319W PAU3P25610 124 aa1.6□□□□□ -2.15
HSH49YOR319W PAU24P38155 120 aa1.6□□□□□ -2.15
HSH49YOR319W YIR020CP40575 100 aa1.6□□□□□ -2.15
HSH49YOR319W VMA21P41806 77 aa1.6□□□□□ -2.15
HSH49YOR319W HUR1P45820 110 aa1.6□□□□□ -2.15
HSH49YOR319W ICS3P47034 131 aa1.6□□□□□ -2.15
HSH49YOR319W SWC7Q06707 132 aa1.6□□□□□ -2.15
HSH49YOR319W YGR240C-AQ3E786 66 aa1.6□□□□□ -2.15
HSH49YOR319W YPK9Q12697 1472 aa1.59□□□□□ -2.15
HSH49YOR319W YEA6P39953 335 aa1.59□□□□□ -2.15
HSH49YOR319W YMR141CP40211 102 aa1.59□□□□□ -2.15
HSH49YOR319W HMRA2P0CY13 119 aa1.58□□□□□ -2.16
HSH49YOR319W FYV7Q12247 151 aa1.58□□□□□ -2.16
HSH49YOR319W LAA1P39526 2014 aa1.57□□□□□ -2.16
HSH49YOR319W BUD23P25627 275 aaPredicted RBP1.56□□□□□ -2.16
HSH49YOR319W VPS55P47111 140 aa1.56□□□□□ -2.16
HSH49YOR319W YMR103CQ04436 120 aa1.56□□□□□ -2.16
HSH49YOR319W LYS2P07702 1392 aa1.56□□□□□ -2.16
HSH49YOR319W YBR090CP38253 122 aa1.55□□□□□ -2.16
HSH49YOR319W RPL37BP51402 88 aaKnown RBP1.55□□□□□ -2.16
HSH49YOR319W YMR090WQ04304 227 aaKnown RBP1.55□□□□□ -2.16
HSH49YOR319W YMR321CQ04898 105 aa1.55□□□□□ -2.16
HSH49YOR319W PDR11P40550 1411 aa1.54□□□□□ -2.16
HSH49YOR319W URB1P34241 1764 aaKnown RBP1.54□□□□□ -2.16
HSH49YOR319W YOS1Q3E834 85 aa1.53□□□□□ -2.16
HSH49YOR319W YRF1-6P53819 1859 aa1.52□□□□□ -2.17
HSH49YOR319W BUD4P47136 1447 aa1.52□□□□□ -2.17
HSH49YOR319W YHR138CP38841 114 aaPredicted RBP1.52□□□□□ -2.17
HSH49YOR319W MIC10Q96VH5 97 aa1.52□□□□□ -2.17
HSH49YOR319W YLR419WQ06698 1435 aaKnown RBP1.51□□□□□ -2.17
HSH49YOR319W KRE5P22023 1365 aa1.51□□□□□ -2.17
HSH49YOR319W YER188C-AP0C0V2 99 aa1.51□□□□□ -2.17
HSH49YOR319W UBC5P15732 148 aa1.51□□□□□ -2.17
HSH49YOR319W YCR101CP25607 182 aa1.51□□□□□ -2.17
HSH49YOR319W PAU16P35994 123 aa1.51□□□□□ -2.17
HSH49YOR319W PAU15P40585 124 aa1.51□□□□□ -2.17
HSH49YOR319W LSM6Q06406 86 aaKnown RBP1.51□□□□□ -2.17
HSH49YOR319W YCL048W-AQ2V2Q2 79 aa1.51□□□□□ -2.17
HSH49YOR319W TY3B-IQ7LHG5 1498 aaKnown RBP1.5□□□□□ -2.17
HSH49YOR319W RPL43AP0CX25 92 aaKnown RBP1.5□□□□□ -2.17
HSH49YOR319W RPL43BP0CX26 92 aa1.5□□□□□ -2.17
HSH49YOR319W UBC4P15731 148 aa1.5□□□□□ -2.17
HSH49YOR319W SRB6P32570 121 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms