RNA–Protein interactions for RNA: YOL145C

CTR9, Transcript of Component of the Paf1p complex involved in transcription elongation, yeast

Gene CTR9, Length 3,234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR9	YOL145C	YCR099C	P25657	155 aa		0.95	□□□□□ -2.26
CTR9	YOL145C	YBR090C	P38253	122 aa		0.95	□□□□□ -2.26
CTR9	YOL145C	SNU13	P39990	126 aa	Known RBP	0.95	□□□□□ -2.26
CTR9	YOL145C	YPL261C	Q08976	102 aa		0.95	□□□□□ -2.26
CTR9	YOL145C	YBR056W-A	I2HB52	66 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	IPT1	P38954	527 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	CYB5	P40312	120 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	PAU15	P40585	124 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	SNN1	P48232	102 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	AVO2	Q04749	426 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	HPA2	Q06592	156 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	GPI11	Q06636	219 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	YLR285C-A	Q3E771	56 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	SSN2	P38931	1420 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	YGL041W-A	P0C5N3	154 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	ECM31	P38122	312 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	COX23	P38824	151 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	KEI1	Q06346	221 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	FIT3	Q08907	204 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	DAD1	Q12248	94 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	TAR1	Q8TGM6	124 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	UBR2	Q07963	1872 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	HMRA1	P0CY11	126 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	STF2	P16965	84 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	AIM4	P38305	123 aa	Predicted RBP	0.94	□□□□□ -2.26
CTR9	YOL145C	YBR242W	P38331	238 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	EMC5	P40540	141 aa		0.94	□□□□□ -2.26
CTR9	YOL145C	YMR090W	Q04304	227 aa	Known RBP	0.94	□□□□□ -2.26
CTR9	YOL145C	TSC11	P40061	1430 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	RPS22A	P0C0W1	130 aa	Known RBP	0.93	□□□□□ -2.26
CTR9	YOL145C	MRPL44	P19956	98 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	PAU16	P35994	123 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	MSL1	P40567	111 aa	Predicted RBP	0.93	□□□□□ -2.26
CTR9	YOL145C	PAU5	P43575	122 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	COA6	Q3E846	104 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	KSH1	Q8TGJ3	72 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	ADE6	P38972	1358 aa	Known RBP	0.93	□□□□□ -2.26
CTR9	YOL145C	YEL014C	P39999	101 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	RPL13B	P40212	199 aa	Known RBP	0.93	□□□□□ -2.26
CTR9	YOL145C	YLR296W	Q05898	108 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	MYO2	P19524	1574 aa	Known RBP	0.93	□□□□□ -2.26
CTR9	YOL145C	QCR8	P08525	94 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	HSP150	P32478	413 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	YFL065C	P43539	102 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	GRX5	Q02784	150 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	RAF1	Q06891	181 aa		0.93	□□□□□ -2.26
CTR9	YOL145C	RPL36B	O14455	100 aa	Known RBP	0.92	□□□□□ -2.26
CTR9	YOL145C	RPL36A	P05745	100 aa	Predicted RBP	0.92	□□□□□ -2.26
CTR9	YOL145C	YGL014C-A	P0C5N1	53 aa		0.92	□□□□□ -2.26
CTR9	YOL145C	LSM2	P38203	95 aa	Known RBP	0.92	□□□□□ -2.26
CTR9	YOL145C	BRP1	P53194	125 aa		0.92	□□□□□ -2.26
CTR9	YOL145C	SWC7	Q06707	132 aa		0.92	□□□□□ -2.26
CTR9	YOL145C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.92	□□□□□ -2.26
CTR9	YOL145C	LYS2	P07702	1392 aa		0.92	□□□□□ -2.26
CTR9	YOL145C	HSL1	P34244	1518 aa		0.92	□□□□□ -2.26
CTR9	YOL145C	YER187W	P40102	141 aa		0.92	□□□□□ -2.26
CTR9	YOL145C	CWP2	P43497	92 aa		0.92	□□□□□ -2.26
CTR9	YOL145C	FIT1	Q04433	528 aa		0.92	□□□□□ -2.26
CTR9	YOL145C	YDL157C	Q12082	118 aa		0.92	□□□□□ -2.26
CTR9	YOL145C	TRM732	Q03496	1420 aa		0.92	□□□□□ -2.26
CTR9	YOL145C	SRX1	P36077	127 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	GCV3	P39726	170 aa	Predicted RBP	0.91	□□□□□ -2.26
CTR9	YOL145C	YPR153W	Q06537	140 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	YHR007C-A	Q07074	71 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	YPR203W	Q08994	102 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	COA3	Q3E7B2	85 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	SEC16	P48415	2195 aa	Known RBP	0.91	□□□□□ -2.26
CTR9	YOL145C	KOG1	P38873	1557 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	AQY2	P0CD90	149 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	UBC4	P15731	148 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	MPC1	P53157	130 aa	Known RBP	0.91	□□□□□ -2.26
CTR9	YOL145C	OST5	Q92316	86 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	MDS3	P53094	1487 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	SPC1	P46965	94 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	PRM3	Q08931	133 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	ENV10	Q99382	181 aa		0.91	□□□□□ -2.26
CTR9	YOL145C	TAO3	P40468	2376 aa		0.9	□□□□□ -2.26
CTR9	YOL145C	SWR1	Q05471	1514 aa		0.9	□□□□□ -2.26
CTR9	YOL145C	SEN1	Q00416	2231 aa	Known RBP	0.9	□□□□□ -2.27
CTR9	YOL145C	YCL042W	P25572	119 aa		0.9	□□□□□ -2.27
CTR9	YOL145C	YBR027C	P38220	110 aa		0.9	□□□□□ -2.27
CTR9	YOL145C	MRP17	P28778	131 aa		0.9	□□□□□ -2.27
CTR9	YOL145C	YOS1	Q3E834	85 aa		0.9	□□□□□ -2.27
CTR9	YOL145C	MYO1	P08964	1928 aa		0.9	□□□□□ -2.27
CTR9	YOL145C	ECM12	O13529	151 aa		0.89	□□□□□ -2.27
CTR9	YOL145C	YHR213W	P0CI67	198 aa		0.89	□□□□□ -2.27
CTR9	YOL145C	SRB6	P32570	121 aa		0.89	□□□□□ -2.27
CTR9	YOL145C	VMA21	P41806	77 aa		0.89	□□□□□ -2.27
CTR9	YOL145C	RPL22B	P56628	122 aa	Known RBP	0.89	□□□□□ -2.27
CTR9	YOL145C	LSM6	Q06406	86 aa	Known RBP	0.89	□□□□□ -2.27
CTR9	YOL145C	VAM10	Q08474	114 aa		0.89	□□□□□ -2.27
CTR9	YOL145C	YNL146C-A	Q3E7Z1	64 aa		0.89	□□□□□ -2.27
CTR9	YOL145C	GSC2	P40989	1895 aa		0.89	□□□□□ -2.27
CTR9	YOL145C	PDR11	P40550	1411 aa		0.89	□□□□□ -2.27
CTR9	YOL145C	RSF2	P46974	1380 aa		0.89	□□□□□ -2.27
CTR9	YOL145C	YRF1-3	P0CX14	1859 aa		0.89	□□□□□ -2.27
CTR9	YOL145C	YRF1-7	P0CX15	1859 aa		0.89	□□□□□ -2.27
CTR9	YOL145C	YRF1-6	P53819	1859 aa		0.89	□□□□□ -2.27
CTR9	YOL145C	RPL33A	P05744	107 aa	Known RBP	0.89	□□□□□ -2.27
CTR9	YOL145C	YIL163C	P40448	117 aa		0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms