RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	YCR099C	P25657	155 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	TRR1	P29509	319 aa	Known RBP	0.22	□□□□□ -2.37
UBC7	YMR022W	YKR070W	P36151	352 aa	Known RBP	0.22	□□□□□ -2.37
UBC7	YMR022W	ECM31	P38122	312 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	CCS1	P40202	249 aa	Known RBP	0.22	□□□□□ -2.37
UBC7	YMR022W	YGR269W	P40326	108 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	MPM1	P40364	252 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	CIN5	P40917	295 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	JAC1	P53193	184 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	NQM1	P53228	333 aa	Predicted RBP	0.22	□□□□□ -2.37
UBC7	YMR022W	SNO1	Q03144	224 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	GPI17	Q04080	534 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	YPR127W	Q06494	345 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	YOR072W	Q08486	104 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	YPR203W	Q08994	102 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	CCW12	Q12127	133 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	YLR307C-A	Q3E825	87 aa		0.22	□□□□□ -2.37
UBC7	YMR022W	AHC2	P25649	128 aa		0.21	□□□□□ -2.38
UBC7	YMR022W	HYM1	P32464	399 aa		0.21	□□□□□ -2.38
UBC7	YMR022W	NUF2	P33895	451 aa		0.21	□□□□□ -2.38
UBC7	YMR022W	SEC72	P39742	193 aa	Known RBP	0.21	□□□□□ -2.38
UBC7	YMR022W	POG1	P40473	351 aa		0.21	□□□□□ -2.38
UBC7	YMR022W	XPT1	P47165	209 aa		0.21	□□□□□ -2.38
UBC7	YMR022W	RPS12	P48589	143 aa	Known RBP	0.21	□□□□□ -2.38
UBC7	YMR022W	YDC1	Q02896	317 aa		0.21	□□□□□ -2.38
UBC7	YMR022W	TMA23	Q03525	211 aa		0.21	□□□□□ -2.38
UBC7	YMR022W	LIP1	Q03579	150 aa		0.21	□□□□□ -2.38
UBC7	YMR022W	KEI1	Q06346	221 aa		0.21	□□□□□ -2.38
UBC7	YMR022W	SYM1	Q06563	197 aa		0.21	□□□□□ -2.38
UBC7	YMR022W	YHR213W-B	Q8TGK1	99 aa		0.21	□□□□□ -2.38
UBC7	YMR022W	CMD1	P06787	147 aa	Known RBP	0.2	□□□□□ -2.38
UBC7	YMR022W	RPS25B	P0C0T4	108 aa	Known RBP	0.2	□□□□□ -2.38
UBC7	YMR022W	YGL041W-A	P0C5N3	154 aa		0.2	□□□□□ -2.38
UBC7	YMR022W	ATP7	P30902	174 aa		0.2	□□□□□ -2.38
UBC7	YMR022W	SRP14	P38985	146 aa		0.2	□□□□□ -2.38
UBC7	YMR022W	YER137C	P40083	148 aa	Known RBP	0.2	□□□□□ -2.38
UBC7	YMR022W	TTI2	P47168	421 aa		0.2	□□□□□ -2.38
UBC7	YMR022W	YGL230C	P53074	147 aa		0.2	□□□□□ -2.38
UBC7	YMR022W	TMA20	P89886	181 aa	Predicted RBP	0.2	□□□□□ -2.38
UBC7	YMR022W	IRC19	Q07843	230 aa		0.2	□□□□□ -2.38
UBC7	YMR022W	RPS25A	Q3E792	108 aa	Predicted RBP	0.2	□□□□□ -2.38
UBC7	YMR022W	YOR381W-A	Q3E804	55 aa		0.2	□□□□□ -2.38
UBC7	YMR022W	KTI11	Q3E840	82 aa		0.2	□□□□□ -2.38
UBC7	YMR022W	SRP102	P36057	244 aa	Predicted RBP	0.19	□□□□□ -2.38
UBC7	YMR022W	SHB17	P36136	271 aa	Known RBP	0.19	□□□□□ -2.38
UBC7	YMR022W	FYV4	P38783	130 aa	Predicted RBP	0.19	□□□□□ -2.38
UBC7	YMR022W	PAC10	P48363	199 aa		0.19	□□□□□ -2.38
UBC7	YMR022W	YNL140C	P53910	189 aa		0.19	□□□□□ -2.38
UBC7	YMR022W	YNL122C	P53921	115 aa	Predicted RBP	0.19	□□□□□ -2.38
UBC7	YMR022W	YDR476C	Q03362	224 aa		0.19	□□□□□ -2.38
UBC7	YMR022W	MAK3	Q03503	176 aa		0.19	□□□□□ -2.38
UBC7	YMR022W	YDR102C	Q03864	110 aa		0.19	□□□□□ -2.38
UBC7	YMR022W	AVO2	Q04749	426 aa		0.19	□□□□□ -2.38
UBC7	YMR022W	YDR278C	Q05612	105 aa		0.19	□□□□□ -2.38
UBC7	YMR022W	SPS2	P08459	502 aa		0.18	□□□□□ -2.38
UBC7	YMR022W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.18	□□□□□ -2.38
UBC7	YMR022W	RPL30	P14120	105 aa	Known RBP	0.18	□□□□□ -2.38
UBC7	YMR022W	YKR041W	P36134	250 aa		0.18	□□□□□ -2.38
UBC7	YMR022W	YEL014C	P39999	101 aa		0.18	□□□□□ -2.38
UBC7	YMR022W	YJL009W	P47078	108 aa		0.18	□□□□□ -2.38
UBC7	YMR022W	YGL149W	P53116	101 aa		0.18	□□□□□ -2.38
UBC7	YMR022W	YLR050C	Q12155	161 aa	Known RBP	0.18	□□□□□ -2.38
UBC7	YMR022W	RTC6	O14464	93 aa		0.17	□□□□□ -2.38
UBC7	YMR022W	RPS22A	P0C0W1	130 aa	Known RBP	0.17	□□□□□ -2.38
UBC7	YMR022W	MRS4	P23500	304 aa		0.17	□□□□□ -2.38
UBC7	YMR022W	SPT14	P32363	452 aa		0.17	□□□□□ -2.38
UBC7	YMR022W	CSH1	P38287	376 aa		0.17	□□□□□ -2.38
UBC7	YMR022W	SPC1	P46965	94 aa		0.17	□□□□□ -2.38
UBC7	YMR022W	TOM7	P53507	60 aa		0.17	□□□□□ -2.38
UBC7	YMR022W	MGR2	Q02889	113 aa		0.17	□□□□□ -2.38
UBC7	YMR022W	RAV2	Q03956	351 aa		0.17	□□□□□ -2.38
UBC7	YMR022W	THI74	Q04083	370 aa		0.17	□□□□□ -2.38
UBC7	YMR022W	NKP2	Q06162	153 aa		0.17	□□□□□ -2.38
UBC7	YMR022W	NMA1	Q06178	401 aa	Known RBP	0.17	□□□□□ -2.38
UBC7	YMR022W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.17	□□□□□ -2.38
UBC7	YMR022W	COX5B	P00425	151 aa		0.16	□□□□□ -2.38
UBC7	YMR022W	ATP5	P09457	212 aa		0.16	□□□□□ -2.38
UBC7	YMR022W	CPR5	P35176	225 aa		0.16	□□□□□ -2.38
UBC7	YMR022W	EGD2	P38879	174 aa	Known RBP	0.16	□□□□□ -2.38
UBC7	YMR022W	YGL193C	P53097	103 aa		0.16	□□□□□ -2.38
UBC7	YMR022W	ATP19	P81451	68 aa		0.16	□□□□□ -2.38
UBC7	YMR022W	INO4	P13902	151 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	YBR027C	P38220	110 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	HTD2	P38790	280 aa	Known RBP	0.15	□□□□□ -2.39
UBC7	YMR022W	HHY1	P39982	102 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	YMR141C	P40211	102 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	AIM19	P40502	157 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	EFM5	P53200	248 aa	Known RBP	0.15	□□□□□ -2.39
UBC7	YMR022W	YIP3	P53633	176 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	YPL067C	Q02754	198 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	IRC21	Q04772	201 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	ATG38	Q05789	226 aa	Known RBP	0.15	□□□□□ -2.39
UBC7	YMR022W	YPR153W	Q06537	140 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	YPD1	Q07688	167 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	RRT7	Q07829	113 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	HUT1	Q12520	339 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	COA6	Q3E846	104 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	YLL066W-B	Q8TGJ7	56 aa		0.15	□□□□□ -2.39
UBC7	YMR022W	RPL33A	P05744	107 aa	Known RBP	0.14	□□□□□ -2.39
UBC7	YMR022W	NHP6A	P11632	93 aa	Known RBP	0.14	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms