RNA–Protein interactions for RNA: YKL161C

KDX1, Transcript of Protein kinase, yeast

Gene KDX1, Length 1,302 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KDX1	YKL161C	YAR029W	P39549	74 aa		2.94	□□□□□ -1.94
KDX1	YKL161C	RPL37A	P49166	88 aa	Known RBP	2.94	□□□□□ -1.94
KDX1	YKL161C	RUB1	Q03919	77 aa		2.94	□□□□□ -1.94
KDX1	YKL161C	YPL261C	Q08976	102 aa		2.94	□□□□□ -1.94
KDX1	YKL161C	OST5	Q92316	86 aa		2.94	□□□□□ -1.94
KDX1	YKL161C	ROM2	P51862	1356 aa	Known RBP	2.94	□□□□□ -1.94
KDX1	YKL161C	YSF3	P0C074	85 aa	Predicted RBP	2.93	□□□□□ -1.94
KDX1	YKL161C	HFA1	P32874	2273 aa		2.93	□□□□□ -1.94
KDX1	YKL161C	YER039C-A	P0CD97	72 aa		2.93	□□□□□ -1.94
KDX1	YKL161C	EMP24	P32803	203 aa	Known RBP	2.93	□□□□□ -1.94
KDX1	YKL161C	LCL2	Q08045	131 aa		2.92	□□□□□ -1.94
KDX1	YKL161C	ADK1	P07170	222 aa	Known RBP	2.91	□□□□□ -1.94
KDX1	YKL161C	YER187W	P40102	141 aa		2.91	□□□□□ -1.94
KDX1	YKL161C	YLR194C	Q05777	254 aa		2.91	□□□□□ -1.94
KDX1	YKL161C	YLR365W	Q7LIF2	110 aa		2.91	□□□□□ -1.94
KDX1	YKL161C	GTT1	P40582	234 aa		2.9	□□□□□ -1.95
KDX1	YKL161C	AIM4	P38305	123 aa	Predicted RBP	2.89	□□□□□ -1.95
KDX1	YKL161C	RGI1	P40043	161 aa	Predicted RBP	2.88	□□□□□ -1.95
KDX1	YKL161C	SWC7	Q06707	132 aa		2.88	□□□□□ -1.95
KDX1	YKL161C	FIT3	Q08907	204 aa		2.88	□□□□□ -1.95
KDX1	YKL161C	SLH1	P53327	1967 aa	Known RBP	2.87	□□□□□ -1.95
KDX1	YKL161C	POR2	P40478	281 aa		2.87	□□□□□ -1.95
KDX1	YKL161C	RPL22B	P56628	122 aa	Known RBP	2.87	□□□□□ -1.95
KDX1	YKL161C	DAD1	Q12248	94 aa		2.87	□□□□□ -1.95
KDX1	YKL161C	YIL163C	P40448	117 aa		2.86	□□□□□ -1.95
KDX1	YKL161C	ICS3	P47034	131 aa		2.86	□□□□□ -1.95
KDX1	YKL161C	RPS12	P48589	143 aa	Known RBP	2.85	□□□□□ -1.95
KDX1	YKL161C	YHR213W-B	Q8TGK1	99 aa		2.85	□□□□□ -1.95
KDX1	YKL161C	GSC2	P40989	1895 aa		2.84	□□□□□ -1.95
KDX1	YKL161C	RPL22A	P05749	121 aa	Known RBP	2.84	□□□□□ -1.96
KDX1	YKL161C	YHR130C	P38834	111 aa		2.84	□□□□□ -1.96
KDX1	YKL161C	PAU12	P53343	120 aa		2.84	□□□□□ -1.96
KDX1	YKL161C	TSC11	P40061	1430 aa		2.83	□□□□□ -1.96
KDX1	YKL161C	MIC27	P50945	234 aa		2.83	□□□□□ -1.96
KDX1	YKL161C	GNA1	P43577	159 aa	Predicted RBP	2.82	□□□□□ -1.96
KDX1	YKL161C	PCC1	Q3E833	88 aa		2.82	□□□□□ -1.96
KDX1	YKL161C	YBR013C	P38215	129 aa		2.81	□□□□□ -1.96
KDX1	YKL161C	YIR020C	P40575	100 aa		2.81	□□□□□ -1.96
KDX1	YKL161C	SNN1	P48232	102 aa		2.81	□□□□□ -1.96
KDX1	YKL161C	SRX1	P36077	127 aa		2.8	□□□□□ -1.96
KDX1	YKL161C	YER137C	P40083	148 aa	Known RBP	2.8	□□□□□ -1.96
KDX1	YKL161C	HUR1	P45820	110 aa		2.8	□□□□□ -1.96
KDX1	YKL161C	LHP1	P33399	275 aa	Known RBP	2.79	□□□□□ -1.96
KDX1	YKL161C	MRPL31	P14063	131 aa	Predicted RBP	2.78	□□□□□ -1.96
KDX1	YKL161C	COX23	P38824	151 aa		2.77	□□□□□ -1.97
KDX1	YKL161C	VMA21	P41806	77 aa		2.77	□□□□□ -1.97
KDX1	YKL161C	OCA6	Q12454	224 aa		2.77	□□□□□ -1.97
KDX1	YKL161C	YLR363W-A	Q3E747	85 aa		2.77	□□□□□ -1.97
KDX1	YKL161C	TY4B-J	P47024	1803 aa		2.76	□□□□□ -1.97
KDX1	YKL161C	YGL041C-B	Q3E750	60 aa		2.76	□□□□□ -1.97
KDX1	YKL161C	YPK9	Q12697	1472 aa		2.75	□□□□□ -1.97
KDX1	YKL161C	YBR090C	P38253	122 aa		2.75	□□□□□ -1.97
KDX1	YKL161C	HHY1	P39982	102 aa		2.75	□□□□□ -1.97
KDX1	YKL161C	RPL37B	P51402	88 aa	Known RBP	2.75	□□□□□ -1.97
KDX1	YKL161C	YEA6	P39953	335 aa		2.74	□□□□□ -1.97
KDX1	YKL161C	HUG1	Q6Q5K6	68 aa		2.74	□□□□□ -1.97
KDX1	YKL161C	MVB12	P42939	101 aa		2.72	□□□□□ -1.97
KDX1	YKL161C	YOS1	Q3E834	85 aa		2.72	□□□□□ -1.97
KDX1	YKL161C	UBC5	P15732	148 aa		2.7	□□□□□ -1.98
KDX1	YKL161C	PAU2	P32612	120 aa		2.7	□□□□□ -1.98
KDX1	YKL161C	YMR103C	Q04436	120 aa		2.7	□□□□□ -1.98
KDX1	YKL161C	YGR240C-A	Q3E786	66 aa		2.7	□□□□□ -1.98
KDX1	YKL161C	ENV10	Q99382	181 aa		2.7	□□□□□ -1.98
KDX1	YKL161C	CYB5	P40312	120 aa		2.69	□□□□□ -1.98
KDX1	YKL161C	YCL048W-A	Q2V2Q2	79 aa		2.69	□□□□□ -1.98
KDX1	YKL161C	YLR285C-A	Q3E771	56 aa		2.69	□□□□□ -1.98
KDX1	YKL161C	PAU24	P38155	120 aa		2.68	□□□□□ -1.98
KDX1	YKL161C	YMR141C	P40211	102 aa		2.68	□□□□□ -1.98
KDX1	YKL161C	PAU19	P0CE85	124 aa		2.67	□□□□□ -1.98
KDX1	YKL161C	PAU3	P25610	124 aa		2.67	□□□□□ -1.98
KDX1	YKL161C	YMR090W	Q04304	227 aa	Known RBP	2.67	□□□□□ -1.98
KDX1	YKL161C	FYV7	Q12247	151 aa		2.67	□□□□□ -1.98
KDX1	YKL161C	LYS2	P07702	1392 aa		2.65	□□□□□ -1.99
KDX1	YKL161C	UBC4	P15731	148 aa		2.64	□□□□□ -1.99
KDX1	YKL161C	YMR321C	Q04898	105 aa		2.64	□□□□□ -1.99
KDX1	YKL161C	YRF1-3	P0CX14	1859 aa		2.63	□□□□□ -1.99
KDX1	YKL161C	YRF1-7	P0CX15	1859 aa		2.63	□□□□□ -1.99
KDX1	YKL161C	GEA1	P47102	1408 aa	Predicted RBP	2.63	□□□□□ -1.99
KDX1	YKL161C	YLR419W	Q06698	1435 aa	Known RBP	2.63	□□□□□ -1.99
KDX1	YKL161C	VPS55	P47111	140 aa		2.62	□□□□□ -1.99
KDX1	YKL161C	MIC10	Q96VH5	97 aa		2.61	□□□□□ -1.99
KDX1	YKL161C	DNA2	P38859	1522 aa		2.61	□□□□□ -1.99
KDX1	YKL161C	YCR101C	P25607	182 aa		2.6	□□□□□ -1.99
KDX1	YKL161C	KRE5	P22023	1365 aa		2.6	□□□□□ -1.99
KDX1	YKL161C	HMRA2	P0CY13	119 aa		2.59	□□□□□ -2
KDX1	YKL161C	YHR138C	P38841	114 aa	Predicted RBP	2.58	□□□□□ -2
KDX1	YKL161C	TY3B-I	Q7LHG5	1498 aa	Known RBP	2.58	□□□□□ -2
KDX1	YKL161C	BUD23	P25627	275 aa	Predicted RBP	2.56	□□□□□ -2
KDX1	YKL161C	MIX14	Q04341	121 aa		2.55	□□□□□ -2
KDX1	YKL161C	LSM6	Q06406	86 aa	Known RBP	2.55	□□□□□ -2
KDX1	YKL161C	GEA2	P39993	1459 aa	Known RBP	2.55	□□□□□ -2
KDX1	YKL161C	PAU16	P35994	123 aa		2.54	□□□□□ -2
KDX1	YKL161C	PAU15	P40585	124 aa		2.54	□□□□□ -2
KDX1	YKL161C	YJR128W	P47162	119 aa		2.54	□□□□□ -2
KDX1	YKL161C	SRB6	P32570	121 aa		2.53	□□□□□ -2
KDX1	YKL161C	PDR11	P40550	1411 aa		2.52	□□□□□ -2.01
KDX1	YKL161C	CCW14	O13547	238 aa		2.52	□□□□□ -2.01
KDX1	YKL161C	MRPS12	P53732	153 aa		2.52	□□□□□ -2.01
KDX1	YKL161C	YOR034C-A	Q3E735	80 aa		2.52	□□□□□ -2.01
KDX1	YKL161C	YOL118C	Q08259	102 aa		2.51	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms