RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W RPL12AP0CX53 165 aaKnown RBP4.42□□□□□ -1.7
MSP1YGR028W RPL12BP0CX54 165 aa4.42□□□□□ -1.7
MSP1YGR028W YCR023CP25351 611 aa4.42□□□□□ -1.7
MSP1YGR028W KTI12P34253 313 aaKnown RBP4.42□□□□□ -1.7
MSP1YGR028W CDC40P40968 455 aaPredicted RBP4.42□□□□□ -1.7
MSP1YGR028W COX16P47081 118 aa4.42□□□□□ -1.7
MSP1YGR028W DAD3P69850 94 aa4.42□□□□□ -1.7
MSP1YGR028W UPS3Q04006 179 aa4.42□□□□□ -1.7
MSP1YGR028W DPP1Q05521 289 aa4.42□□□□□ -1.7
MSP1YGR028W YCL001W-BQ96VH2 84 aa4.42□□□□□ -1.7
MSP1YGR028W SRP14P38985 146 aa4.41□□□□□ -1.7
MSP1YGR028W SUR2P38992 349 aa4.41□□□□□ -1.7
MSP1YGR028W YJL028WP47062 111 aa4.41□□□□□ -1.7
MSP1YGR028W YGR026WP53217 278 aa4.41□□□□□ -1.7
MSP1YGR028W VMA9Q3E7B6 73 aa4.41□□□□□ -1.7
MSP1YGR028W PCC1Q3E833 88 aa4.41□□□□□ -1.7
MSP1YGR028W MRPL31P14063 131 aaPredicted RBP4.4□□□□□ -1.71
MSP1YGR028W SRP21P32342 167 aa4.4□□□□□ -1.71
MSP1YGR028W SVP26P38869 228 aa4.4□□□□□ -1.71
MSP1YGR028W RPB11P38902 120 aa4.4□□□□□ -1.71
MSP1YGR028W TIM21P53220 239 aa4.4□□□□□ -1.71
MSP1YGR028W SMT3Q12306 101 aaKnown RBP4.4□□□□□ -1.71
MSP1YGR028W ATP14Q12349 124 aa4.4□□□□□ -1.71
MSP1YGR028W RRT15Q3E811 62 aa4.4□□□□□ -1.71
MSP1YGR028W RTC6O14464 93 aa4.39□□□□□ -1.71
MSP1YGR028W TIR1P10863 254 aa4.39□□□□□ -1.71
MSP1YGR028W VMA7P39111 118 aa4.39□□□□□ -1.71
MSP1YGR028W CSM4Q08955 156 aa4.39□□□□□ -1.71
MSP1YGR028W FMP49A0A023PZB3 126 aa4.38□□□□□ -1.71
MSP1YGR028W YHR140WP38842 239 aa4.38□□□□□ -1.71
MSP1YGR028W UBC12P52491 188 aa4.38□□□□□ -1.71
MSP1YGR028W DCN1Q12395 269 aa4.38□□□□□ -1.71
MSP1YGR028W SAL1D6W196 494 aa4.37□□□□□ -1.71
MSP1YGR028W CUP2P15315 225 aa4.37□□□□□ -1.71
MSP1YGR028W QRI5P32344 111 aa4.37□□□□□ -1.71
MSP1YGR028W PHS1P40857 217 aa4.37□□□□□ -1.71
MSP1YGR028W THG1P53215 237 aaKnown RBP4.37□□□□□ -1.71
MSP1YGR028W GIM5Q04493 163 aa4.37□□□□□ -1.71
MSP1YGR028W FCF1Q05498 189 aaPredicted RBP4.37□□□□□ -1.71
MSP1YGR028W RPL33AP05744 107 aaKnown RBP4.36□□□□□ -1.71
MSP1YGR028W SEC59P20048 519 aa4.36□□□□□ -1.71
MSP1YGR028W TEM1P38987 245 aa4.36□□□□□ -1.71
MSP1YGR028W RPL33BP41056 107 aaKnown RBP4.36□□□□□ -1.71
MSP1YGR028W MOG1P47123 218 aa4.36□□□□□ -1.71
MSP1YGR028W BNS1P50084 137 aa4.36□□□□□ -1.71
MSP1YGR028W GPI19Q04082 140 aa4.36□□□□□ -1.71
MSP1YGR028W PAM17P36147 197 aa4.35□□□□□ -1.71
MSP1YGR028W PMP3P87284 55 aa4.35□□□□□ -1.71
MSP1YGR028W RPL27AP0C2H6 136 aaKnown RBP4.34□□□□□ -1.71
MSP1YGR028W UBC5P15732 148 aa4.34□□□□□ -1.71
MSP1YGR028W YGL010WP25338 174 aa4.34□□□□□ -1.71
MSP1YGR028W ZRT1P32804 376 aa4.34□□□□□ -1.71
MSP1YGR028W YDR115WQ04598 105 aa4.34□□□□□ -1.71
MSP1YGR028W TVP18Q04767 167 aa4.34□□□□□ -1.71
MSP1YGR028W GTO3Q04806 366 aa4.34□□□□□ -1.71
MSP1YGR028W LDS1P31379 325 aa4.33□□□□□ -1.72
MSP1YGR028W SRB6P32570 121 aa4.33□□□□□ -1.72
MSP1YGR028W NTF2P33331 125 aaKnown RBP4.33□□□□□ -1.72
MSP1YGR028W MIX23P38162 196 aa4.33□□□□□ -1.72
MSP1YGR028W YMR320WQ04897 101 aa4.33□□□□□ -1.72
MSP1YGR028W ARC18Q05933 178 aaKnown RBP4.33□□□□□ -1.72
MSP1YGR028W SNU23Q12368 194 aaPredicted RBP4.33□□□□□ -1.72
MSP1YGR028W YDR034C-AP0C289 58 aa4.32□□□□□ -1.72
MSP1YGR028W ARC15P40518 154 aaRIP-Chip data4.32□□□□□ -1.72not detected
MSP1YGR028W YGL088WP53151 121 aa4.32□□□□□ -1.72
MSP1YGR028W SDS23P53172 527 aa4.32□□□□□ -1.72
MSP1YGR028W ERI1P62651 68 aaKnown RBP4.32□□□□□ -1.72
MSP1YGR028W YNR034W-AQ3E841 98 aa4.32□□□□□ -1.72
MSP1YGR028W YMR122W-AQ3E842 84 aa4.32□□□□□ -1.72
MSP1YGR028W YAR023CD6VPM8 179 aa4.31□□□□□ -1.72
MSP1YGR028W YKR032WP36127 104 aa4.31□□□□□ -1.72
MSP1YGR028W DAD2P36162 133 aa4.31□□□□□ -1.72
MSP1YGR028W MRPS9P38120 278 aa4.31□□□□□ -1.72
MSP1YGR028W YBR209WP38311 105 aa4.31□□□□□ -1.72
MSP1YGR028W PAU7P39545 55 aa4.31□□□□□ -1.72
MSP1YGR028W YIL059CP40520 121 aa4.31□□□□□ -1.72
MSP1YGR028W PAU5P43575 122 aa4.31□□□□□ -1.72
MSP1YGR028W DCV1P43595 202 aa4.31□□□□□ -1.72
MSP1YGR028W YPL229WQ99395 206 aa4.31□□□□□ -1.72
MSP1YGR028W YPR010C-AA5Z2X5 72 aa4.29□□□□□ -1.72
MSP1YGR028W HMRA1P0CY11 126 aa4.29□□□□□ -1.72
MSP1YGR028W YGR149WP48236 432 aa4.29□□□□□ -1.72
MSP1YGR028W YCL021W-AQ96VH3 125 aa4.29□□□□□ -1.72
MSP1YGR028W RPL23AP0CX41 137 aaKnown RBP4.28□□□□□ -1.72
MSP1YGR028W RPL23BP0CX42 137 aaKnown RBP4.28□□□□□ -1.72
MSP1YGR028W HSP10P38910 106 aa4.28□□□□□ -1.72
MSP1YGR028W PET8P38921 284 aa4.28□□□□□ -1.72
MSP1YGR028W APS2Q00381 147 aa4.28□□□□□ -1.72
MSP1YGR028W ADH3P07246 375 aaKnown RBP4.27□□□□□ -1.73
MSP1YGR028W CPR1P14832 162 aaKnown RBP4.27□□□□□ -1.73
MSP1YGR028W YER085CP40058 173 aa4.27□□□□□ -1.73
MSP1YGR028W BET5Q03630 159 aa4.27□□□□□ -1.73
MSP1YGR028W NHP6AP11632 93 aaKnown RBP4.26□□□□□ -1.73
MSP1YGR028W RPL16AP26784 199 aaKnown RBP4.26□□□□□ -1.73
MSP1YGR028W MRP49P32388 137 aa4.26□□□□□ -1.73
MSP1YGR028W YBL081WP38180 368 aaKnown RBP4.26□□□□□ -1.73
MSP1YGR028W VMA21P41806 77 aa4.26□□□□□ -1.73
MSP1YGR028W FSF1Q12029 327 aaKnown RBP4.26□□□□□ -1.73
MSP1YGR028W POM33Q12164 279 aa4.26□□□□□ -1.73
MSP1YGR028W WIP1Q2V2P8 89 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 6.2 ms