RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 BRD9Q9H8M2 597 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 PIEZO1Q92508 2521 aa16.02■□□□□ 0.15
PHGDH-231ENST00000641939 NCANO14594 1321 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 DPYSL4O14531 572 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 TRIM66O15016 1216 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 CD44P16070 742 aaKnown RBP16.01■□□□□ 0.15
PHGDH-231ENST00000641939 GDI1P31150 447 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 ASPAP45381 313 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 MXI1P50539 228 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 STARD6P59095 220 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 NOP14P78316 857 aaKnown RBP16.01■□□□□ 0.15
PHGDH-231ENST00000641939 PRKCQQ04759 706 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 MLF2Q15773 248 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-231ENST00000641939 CCDC150Q8NCX0 1101 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 PRSS33Q8NF86 280 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 MRPS31Q92665 395 aaKnown RBP16.01■□□□□ 0.15
PHGDH-231ENST00000641939 IRF7Q92985 503 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 RSPRY1Q96DX4 576 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 FAM122AQ96E09 287 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 C8orf48Q96LL4 319 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 SLC46A2Q9BY10 475 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 ELOVL4Q9GZR5 314 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.01■□□□□ 0.151e-6■■■■■ 27.6
PHGDH-231ENST00000641939 COL4A2P08572 1712 aa16.01■□□□□ 0.15
PHGDH-231ENST00000641939 KIF26AQ9ULI4 1882 aaPredicted RBP16■□□□□ 0.15
PHGDH-231ENST00000641939 COL4A3Q01955 1670 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 SOBPA7XYQ1 873 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 PPP1R3GB7ZBB8 358 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 BIN1O00499 593 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 CLDN5O00501 218 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 PI15O43692 258 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 NDST1P52848 882 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 TCERG1LQ5VWI1 586 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 KLHL10Q6JEL2 608 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 DENND5BQ6ZUT9 1274 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 UNC93AQ86WB7 457 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 GPIHBP1Q8IV16 184 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 YAF2Q8IY57 180 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 CMTM8Q8IZV2 173 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 MAB21L3Q8N8X9 362 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 FBXL13Q8NEE6 735 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 CEP63Q96MT8 703 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 B3GNT5Q9BYG0 378 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 BCO2Q9BYV7 579 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 ZNF518BQ9C0D4 1074 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 NIF3L1Q9GZT8 377 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 CYP3A43Q9HB55 503 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 APOBEC3GQ9HC16 384 aaKnown RBP16■□□□□ 0.15
PHGDH-231ENST00000641939 OBP2AQ9NY56 170 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 EHD2Q9NZN4 543 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 ARMCX3Q9UH62 379 aaPredicted RBP16■□□□□ 0.15
PHGDH-231ENST00000641939 CACNA1IQ9P0X4 2223 aa16■□□□□ 0.15
PHGDH-231ENST00000641939 HELZP42694 1942 aaKnown RBP16■□□□□ 0.15
PHGDH-231ENST00000641939 ATP8B3O60423 1300 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 BICDL2A1A5D9 508 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 F8VP50 259 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 ZNF263O14978 683 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 GALR2O43603 387 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-231ENST00000641939 TADA3O75528 432 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 PRAMEF12O95522 483 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 AVPR1AP37288 418 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 PLA2G5P39877 138 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 PTPN5P54829 565 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 FCHO2Q0JRZ9 810 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 INCA1Q0VD86 236 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 DCAF17Q5H9S7 520 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-231ENST00000641939 TXNDC8Q6A555 127 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 FOXR2Q6PJQ5 311 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 FILIP1Q7Z7B0 1213 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 ACOT1Q86TX2 421 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 MON1AQ86VX9 555 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 TRIML1Q8N9V2 468 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 NELFBQ8WX92 580 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 SEMA4DQ92854 862 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 DUSP9Q99956 384 aaKnown RBP15.99■□□□□ 0.15
PHGDH-231ENST00000641939 MED10Q9BTT4 135 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 DDX23Q9BUQ8 820 aaKnown RBP15.99■□□□□ 0.15
PHGDH-231ENST00000641939 FOXQ1Q9C009 403 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 METTL14Q9HCE5 456 aaKnown RBP15.99■□□□□ 0.15
PHGDH-231ENST00000641939 TRPV5Q9NQA5 729 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 HEBP1Q9NRV9 189 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 RAB20Q9NX57 234 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 KIAA1468Q9P260 1216 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 HMGXB4Q9UGU5 601 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 CTNND2Q9UQB3 1225 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 SIT1Q9Y3P8 196 aa15.99■□□□□ 0.15
PHGDH-231ENST00000641939 MYO15AQ9UKN7 3530 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 DMDP11532 3685 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 KANSL1LA0AUZ9 987 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 CHADO15335 359 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 LRRN2O75325 713 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 TRIM21P19474 475 aaKnown RBP15.98■□□□□ 0.15
PHGDH-231ENST00000641939 CACNA2D1P54289 1103 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 TCF15Q12870 199 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 CAMK4Q16566 473 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 TTI2Q6NXR4 508 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 FRMD5Q7Z6J6 570 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 FAM35AQ86V20 835 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 CRYBG2Q8N1P7 616 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 CELF5Q8N6W0 485 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms