RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 GOLGA8DPQ0D2H9 430 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 CUL2Q13617 745 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 RAPGEF1Q13905 1077 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 UPP1Q16831 310 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 ARHGAP44Q17R89 818 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 ZNF667Q5HYK9 610 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 IL31Q6EBC2 164 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 RSPO2Q6UXX9 243 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-228ENST00000641847 RRAGAQ7L523 313 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 CACNA2D4Q7Z3S7 1137 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 COLGALT2Q8IYK4 626 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 C3orf58Q8NDZ4 430 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 SMG7Q92540 1137 aaKnown RBP10.03□□□□□ -0.8
PHGDH-228ENST00000641847 KAT5Q92993 513 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 TATDN2Q93075 761 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 DDX27Q96GQ7 796 aaKnown RBP10.03□□□□□ -0.8
PHGDH-228ENST00000641847 FAM81BQ96LP2 452 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 KREMEN1Q96MU8 473 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 NELL2Q99435 816 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 ARID3AQ99856 593 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 TMEM175Q9BSA9 504 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 NAA15Q9BXJ9 866 aaKnown RBP10.03□□□□□ -0.8
PHGDH-228ENST00000641847 NRDE2Q9H7Z3 1164 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 NXF1Q9UBU9 619 aaKnown RBP10.03□□□□□ -0.8
PHGDH-228ENST00000641847 DNAJB4Q9UDY4 337 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 FBXL5Q9UKA1 691 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 RALYQ9UKM9 306 aaKnown RBP10.03□□□□□ -0.8
PHGDH-228ENST00000641847 POLIQ9UNA4 740 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 PRG3Q9Y2Y8 225 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-228ENST00000641847 CACNA1IQ9P0X4 2223 aa10.03□□□□□ -0.8
PHGDH-228ENST00000641847 LRRC53A6NM62 1247 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 AKR1B15C9JRZ8 316 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-228ENST00000641847 F8VZ95 297 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 RNF225M0QZC1 329 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-228ENST00000641847 LILRB5O75023 590 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 ALDH2P05091 517 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 PTMAP06454 111 aaKnown RBP10.02□□□□□ -0.81
PHGDH-228ENST00000641847 GALTP07902 379 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 RAP1GAPP47736 663 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 MFAP3P55082 362 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 JAM2P57087 298 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 ZBED6P86452 979 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 SPEM2Q0P670 501 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 MLF2Q15773 248 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-228ENST00000641847 WDR72Q3MJ13 1102 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 LAIR1Q6GTX8 287 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 PDXDC1Q6P996 788 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 MTSS1LQ765P7 747 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 GET4Q7L5D6 327 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-228ENST00000641847 ENOSF1Q7L5Y1 443 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 CNGA4Q8IV77 575 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 CELF5Q8N6W0 485 aaKnown RBP10.02□□□□□ -0.81
PHGDH-228ENST00000641847 ZNF397Q8NF99 534 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-228ENST00000641847 HASPINQ8TF76 798 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 BAP1Q92560 729 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 SPAG5Q96R06 1193 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 MYADMQ96S97 322 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 PPP1R9BQ96SB3 815 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 EDEM3Q9BZQ6 932 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 GPR88Q9GZN0 384 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 SMYD3Q9H7B4 428 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 ABHD10Q9NUJ1 306 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 CAPN11Q9UMQ6 739 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 MRPS17Q9Y2R5 130 aaKnown RBP10.02□□□□□ -0.81
PHGDH-228ENST00000641847 LUC7L2Q9Y383 392 aaKnown RBP10.02□□□□□ -0.81
PHGDH-228ENST00000641847 SNX9Q9Y5X1 595 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 NUMBLQ9Y6R0 609 aa10.02□□□□□ -0.81
PHGDH-228ENST00000641847 ZFYVE26Q68DK2 2539 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 KPNA7A9QM74 516 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 ANHXE9PGG2 379 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 F8W810 466 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 TMEM189-UBE2V1I3L0A0 370 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 C2CD2LO14523 706 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 NRP1O14786 923 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 B3GAT3O94766 335 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 RETP07949 1114 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 PNMA6AP0CW24 399 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-228ENST00000641847 CD58P19256 250 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 IGFBP6P24592 240 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-228ENST00000641847 KRT9P35527 623 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 STAT1P42224 750 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 SLC11A1P49279 550 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 ADKP55263 362 aaKnown RBP10.01□□□□□ -0.81
PHGDH-228ENST00000641847 GSDMDP57764 484 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 LILRA4P59901 499 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 HTR4Q13639 388 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 DRAP1Q14919 205 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-228ENST00000641847 SLC44A4Q53GD3 710 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 DSTYKQ6XUX3 929 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 CCDC186Q7Z3E2 898 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 TMEM173Q86WV6 379 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-228ENST00000641847 GPIHBP1Q8IV16 184 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 TC2NQ8N9U0 490 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 HDAC7Q8WUI4 952 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 FAXDC2Q96IV6 333 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 COLEC11Q9BWP8 271 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 STK33Q9BYT3 514 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 SDCBP2Q9H190 292 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 PLEKHA4Q9H4M7 779 aa10.01□□□□□ -0.81
PHGDH-228ENST00000641847 MARCH5Q9NX47 278 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms