RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 ATF2P15336 505 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 SSTR3P32745 418 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-220ENST00000641570 MAGEA11P43364 429 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 NRIP1P48552 1158 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 KIF11P52732 1056 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 KRT83P78385 493 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 CDK17Q00537 523 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 IFRD2Q12894 506 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-220ENST00000641570 DUSP4Q13115 394 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 CCDC122Q5T0U0 273 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 LLGL2Q6P1M3 1020 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 RNF19BQ6ZMZ0 732 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 IRF2BP2Q7Z5L9 587 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 SPRED2Q7Z698 418 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 KIAA1328Q86T90 577 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 ERICH1Q86X53 443 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 C1orf131Q8NDD1 294 aaKnown RBP13.69□□□□□ -0.22
PHGDH-220ENST00000641570 UBA3Q8TBC4 463 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 SLC20A1Q8WUM9 679 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 CASP10Q92851 521 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 SECISBP2LQ93073 1101 aaKnown RBP13.69□□□□□ -0.22
PHGDH-220ENST00000641570 FAM161BQ96MY7 647 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 B3GNT5Q9BYG0 378 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 PLEKHA4Q9H4M7 779 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 DZANK1Q9NVP4 752 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 LMCD1Q9NZU5 365 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 HSFX1Q9UBD0 423 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 STRIP2Q9ULQ0 834 aa13.69□□□□□ -0.22
PHGDH-220ENST00000641570 ARHGAP6O43182 974 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 SART1O43290 800 aaKnown RBP13.68□□□□□ -0.22
PHGDH-220ENST00000641570 TGM5O43548 720 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 NCK2O43639 380 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 EFEMP2O95967 443 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 C8AP07357 584 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 CYP2F1P24903 491 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 DNAJB1P25685 340 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 IRS1P35568 1242 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 CDR1P51861 262 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 C10orf76Q5T2E6 689 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 NAA35Q5VZE5 725 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 RTL10Q7L3V2 364 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 ZNF571Q7Z3V5 609 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-220ENST00000641570 LRRC8AQ8IWT6 810 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 FUKQ8N0W3 1084 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 ATAD1Q8NBU5 361 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 KREMEN2Q8NCW0 462 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 SLC7A14Q8TBB6 771 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 PDLIM2Q96JY6 352 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 TRIM62Q9BVG3 475 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 LHX5Q9H2C1 402 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 FBXO44Q9H4M3 255 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 PIDD1Q9HB75 910 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 ACP6Q9NPH0 428 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 MAN1C1Q9NR34 630 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 ADAMTS1Q9UHI8 967 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 NOCTQ9UK39 431 aaKnown RBP13.68□□□□□ -0.22
PHGDH-220ENST00000641570 SLC27A5Q9Y2P5 690 aa13.68□□□□□ -0.22
PHGDH-220ENST00000641570 F8VP50 259 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 RFXAPO00287 272 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 PER2O15055 1255 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 CCP110O43303 1012 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 TBC1D4O60343 1298 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 CLASP2O75122 1294 aaKnown RBP13.67□□□□□ -0.22
PHGDH-220ENST00000641570 RTN3O95197 1032 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-220ENST00000641570 C1RP00736 705 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 CALCAP01258 141 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 CSH1P0DML2 217 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 CSH2P0DML3 217 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 HAPLN1P10915 354 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-220ENST00000641570 FMO1Q01740 532 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 TWF1Q12792 350 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 MAPK8IP2Q13387 824 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-220ENST00000641570 ARID5BQ14865 1188 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 SKIV2LQ15477 1246 aaKnown RBP13.67□□□□□ -0.22
PHGDH-220ENST00000641570 SLC18A3Q16572 532 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 CLEC16AQ2KHT3 1053 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 DENND1BQ6P3S1 775 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 TOGARAM2Q6ZUX3 1019 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 LRRTM3Q86VH5 581 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 HDAC7Q8WUI4 952 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 CTNNBL1Q8WYA6 563 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-220ENST00000641570 TFAP2BQ92481 460 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 PPP1R13BQ96KQ4 1090 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 C8orf48Q96LL4 319 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 CEP295NLQ96MC4 621 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 ZNF512Q96ME7 567 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-220ENST00000641570 PPP1R9BQ96SB3 815 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 LPIN3Q9BQK8 851 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 PNPLA8Q9NP80 782 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 TMLHEQ9NVH6 421 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 ADAM22Q9P0K1 906 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 UXTQ9UBK9 157 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-220ENST00000641570 MAGED2Q9UNF1 606 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-220ENST00000641570 YIPF1Q9Y548 306 aa13.67□□□□□ -0.22
PHGDH-220ENST00000641570 EPOPA6NHQ4 379 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 SOWAHDA6NJG2 315 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 ADAM12O43184 909 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 RTN2O75298 545 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 FBXO21O94952 628 aa13.66□□□□□ -0.22
PHGDH-220ENST00000641570 SPATA31D3P0C874 917 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms