RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 TMEM110Q86TL2 294 aa17.31■□□□□ 0.36
PHGDH-216ENST00000641375 RNF169Q8NCN4 708 aa17.31■□□□□ 0.36
PHGDH-216ENST00000641375 JOSD2Q8TAC2 188 aa17.31■□□□□ 0.36
PHGDH-216ENST00000641375 SLC4A5Q9BY07 1137 aa17.31■□□□□ 0.36
PHGDH-216ENST00000641375 PLEKHA4Q9H4M7 779 aa17.31■□□□□ 0.36
PHGDH-216ENST00000641375 CYLDQ9NQC7 956 aa17.31■□□□□ 0.36
PHGDH-216ENST00000641375 ESYT3A0FGR9 886 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 BHMG1C9JSJ3 638 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-216ENST00000641375 RARAP10276 462 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 PAX3P23760 479 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 FNTAP49354 379 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 AFF1P51825 1210 aaKnown RBP17.3■□□□□ 0.36
PHGDH-216ENST00000641375 GRIK3Q13003 919 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 GPS2Q13227 327 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 NNTQ13423 1086 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 SMC1AQ14683 1233 aaKnown RBP17.3■□□□□ 0.36
PHGDH-216ENST00000641375 HADHQ16836 314 aaKnown RBP17.3■□□□□ 0.36
PHGDH-216ENST00000641375 OR6B2Q6IFH4 312 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 PMF1Q6P1K2 205 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 CCDC137Q6PK04 289 aaKnown RBP17.3■□□□□ 0.36
PHGDH-216ENST00000641375 B3GALNT2Q8NCR0 500 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 CASKIN2Q8WXE0 1202 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 SEC14L1Q92503 715 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 SENP8Q96LD8 212 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 LRRC19Q9H756 370 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 HOMER3Q9NSC5 361 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 NFU1Q9UMS0 254 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 CEP350Q5VT06 3117 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 GABRDO14764 452 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 GJC1P36383 396 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 LHX1P48742 406 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 COPS2P61201 443 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 SIX1Q15475 284 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-216ENST00000641375 UPP1Q16831 310 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 ZFYVE27Q5T4F4 411 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 ECHDC2Q86YB7 292 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 ZDHHC14Q8IZN3 488 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 CAVIN3Q969G5 261 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 RGS18Q9NS28 235 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 ASNSD1Q9NWL6 643 aa17.3■□□□□ 0.36
PHGDH-216ENST00000641375 TCRBV7S2A1N4TA0A589 114 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 DNM1LO00429 736 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 RNF8O76064 485 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 KRT7P08729 469 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 CCDC130P13994 396 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 CAPN2P17655 700 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 SLC8A3P57103 927 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 WSCD1Q658N2 575 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 TRAF7Q6Q0C0 670 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 FAM183BPQ6ZVS7 135 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 OSBPL8Q9BZF1 889 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 FAM114A2Q9NRY5 505 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 HCRTO43612 131 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 LRCH4O75427 683 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 EOMESO95936 686 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 RALAP11233 206 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 ADORA2BP29275 332 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 COILP38432 576 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-216ENST00000641375 RGS7P49802 495 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 ZNF143P52747 638 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-216ENST00000641375 DSTYKQ6XUX3 929 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 OSTM1Q86WC4 334 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 CCDC105Q8IYK2 499 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 EMC1Q8N766 993 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 SH3TC2Q8TF17 1288 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 UROC1Q96N76 676 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 BEGAINQ9BUH8 593 aa17.29■□□□□ 0.36
PHGDH-216ENST00000641375 KRT1P04264 644 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 DESP17661 470 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 GPD1P21695 349 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 ACADSBP45954 432 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 AARSP49588 968 aaKnown RBP eCLIP17.28■□□□□ 0.36
PHGDH-216ENST00000641375 SLC6A3Q01959 620 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 KLF1Q13351 362 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-216ENST00000641375 HLTFQ14527 1009 aaKnown RBP eCLIP17.28■□□□□ 0.36
PHGDH-216ENST00000641375 SLC24A5Q71RS6 500 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 SND1Q7KZF4 910 aaKnown RBP eCLIP17.28■□□□□ 0.361e-7■■■■□ 19.4
PHGDH-216ENST00000641375 ZNF598Q86UK7 904 aaKnown RBP17.28■□□□□ 0.36
PHGDH-216ENST00000641375 JAMLQ86YT9 394 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 SLC2A14Q8TDB8 520 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 SLITRK1Q96PX8 696 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 HNRNPABQ99729 332 aaKnown RBP17.28■□□□□ 0.36
PHGDH-216ENST00000641375 ERP44Q9BS26 406 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 FTHL17Q9BXU8 183 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 FEZ2Q9UHY8 353 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-216ENST00000641375 CASTOR2A6NHX0 329 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 INPPL1O15357 1258 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 POMCP01189 267 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 TCF4P15884 667 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 PTPN1P18031 435 aaKnown RBP17.28■□□□□ 0.36
PHGDH-216ENST00000641375 PTPN7P35236 360 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 PLA2G4AP47712 749 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 RPL34P49207 117 aaKnown RBP17.28■□□□□ 0.36
PHGDH-216ENST00000641375 CDK7P50613 346 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 SLC25A11Q02978 314 aaKnown RBP17.28■□□□□ 0.36
PHGDH-216ENST00000641375 TUSC3Q13454 348 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 OLFML1Q6UWY5 402 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 SPATA18Q8TC71 538 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 HSFY1Q96LI6 401 aa17.28■□□□□ 0.36
PHGDH-216ENST00000641375 CNPY3Q9BT09 278 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms