RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 MAN2B1O00754 1011 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 ATP8B3O60423 1300 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 STX10O60499 249 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 EPB41P11171 864 aaKnown RBP18.87■□□□□ 0.61
PTPN11-207ENST00000639857 F5P12259 2224 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 PFKLP17858 780 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 BDNFP23560 247 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 HOXD11P31277 338 aaPredicted RBP18.87■□□□□ 0.61
PTPN11-207ENST00000639857 CDR1P51861 262 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 PLCB2Q00722 1185 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 STIM1Q13586 685 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 ARHGAP29Q52LW3 1261 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 MDH1BQ5I0G3 518 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 ZNF852Q6ZMS4 543 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 TPRG1Q6ZUI0 275 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 MON1AQ86VX9 555 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 SCN4BQ8IWT1 228 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 ZC3H3Q8IXZ2 948 aaKnown RBP18.87■□□□□ 0.61
PTPN11-207ENST00000639857 CMTM8Q8IZV2 173 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 CELF5Q8N6W0 485 aaKnown RBP18.87■□□□□ 0.61
PTPN11-207ENST00000639857 FAXDC2Q96IV6 333 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 C8orf48Q96LL4 319 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 SLC46A2Q9BY10 475 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 TMEM8AQ9HCN3 771 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 LTB4R2Q9NPC1 389 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 MAGED2Q9UNF1 606 aaPredicted RBP18.87■□□□□ 0.61
PTPN11-207ENST00000639857 PIEZO1Q92508 2521 aa18.87■□□□□ 0.61
PTPN11-207ENST00000639857 NCAM2O15394 837 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 SLC16A3O15427 465 aaKnown RBP18.86■□□□□ 0.61
PTPN11-207ENST00000639857 CLSTN1O94985 981 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 HLA-DRAP01903 254 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 TRIM21P19474 475 aaKnown RBP18.86■□□□□ 0.61
PTPN11-207ENST00000639857 AVPR1AP37288 418 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 GRIK1P39086 918 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 PPP3CCP48454 512 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 PDE6CP51160 858 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 NOP14P78316 857 aaKnown RBP18.86■□□□□ 0.61
PTPN11-207ENST00000639857 FKBP3Q00688 224 aaKnown RBP18.86■□□□□ 0.61
PTPN11-207ENST00000639857 ZNF268Q14587 947 aaPredicted RBP18.86■□□□□ 0.61
PTPN11-207ENST00000639857 SDHAF4Q5VUM1 108 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 FOXR2Q6PJQ5 311 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 DENND5BQ6ZUT9 1274 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 UNC93AQ86WB7 457 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 CCDC150Q8NCX0 1101 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 BPIFB1Q8TDL5 484 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 RSPRY1Q96DX4 576 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 TTLL2Q9BWV7 592 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 FOXQ1Q9C009 403 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 HEBP1Q9NRV9 189 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 CHMP5Q9NZZ3 219 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 FANCMQ8IYD8 2048 aa18.86■□□□□ 0.61
PTPN11-207ENST00000639857 COL4A3Q01955 1670 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 PSMA7O14818 248 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 TADA3O75528 432 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 PRAMEF12O95522 483 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 TRIM49P0CI25 452 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 TRIM49CP0CI26 452 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 ASPAP45381 313 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 PPP3CAQ08209 521 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 KRT39Q6A163 491 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 ADSSL1Q8N142 457 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 CSGALNACT1Q8TDX6 532 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 DHTKD1Q96HY7 919 aaPredicted RBP18.85■□□□□ 0.61
PTPN11-207ENST00000639857 BCO2Q9BYV7 579 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 DPEP3Q9H4B8 488 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 FAM124BQ9H5Z6 455 aaPredicted RBP18.85■□□□□ 0.61
PTPN11-207ENST00000639857 CYP3A43Q9HB55 503 aa18.85■□□□□ 0.61
PTPN11-207ENST00000639857 THG1LQ9NWX6 298 aaKnown RBP18.85■□□□□ 0.61
PTPN11-207ENST00000639857 RPS9P46781 194 aaKnown RBP18.84■□□□□ 0.61
PTPN11-207ENST00000639857 GCLMP48507 274 aa18.84■□□□□ 0.61
PTPN11-207ENST00000639857 CDH8P55286 799 aa18.84■□□□□ 0.61
PTPN11-207ENST00000639857 INCA1Q0VD86 236 aa18.84■□□□□ 0.61
PTPN11-207ENST00000639857 UBXN2BQ14CS0 331 aa18.84■□□□□ 0.61
PTPN11-207ENST00000639857 SCARA5Q6ZMJ2 495 aa18.84■□□□□ 0.61
PTPN11-207ENST00000639857 MAB21L3Q8N8X9 362 aa18.84■□□□□ 0.61
PTPN11-207ENST00000639857 CLDN23Q96B33 292 aa18.84■□□□□ 0.61
PTPN11-207ENST00000639857 IER2Q9BTL4 223 aa18.84■□□□□ 0.61
PTPN11-207ENST00000639857 B3GNT5Q9BYG0 378 aa18.84■□□□□ 0.61
PTPN11-207ENST00000639857 DNAI2Q9GZS0 605 aa18.84■□□□□ 0.61
PTPN11-207ENST00000639857 SDCBP2Q9H190 292 aa18.84■□□□□ 0.61
PTPN11-207ENST00000639857 C8orf33Q9H7E9 229 aaPredicted RBP18.84■□□□□ 0.61
PTPN11-207ENST00000639857 TDP1Q9NUW8 608 aa18.84■□□□□ 0.61
PTPN11-207ENST00000639857 F8VP50 259 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 H0Y858 1186 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 DCNP07585 359 aaKnown RBP18.83■□□□□ 0.6
PTPN11-207ENST00000639857 CCNE1P24864 410 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 MXI1P50539 228 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 ANGPT1Q15389 498 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 TXNDC8Q6A555 127 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 CRYBG2Q8N1P7 616 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 TTC39CQ8N584 583 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 STKLD1Q8NE28 680 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 TAS1R2Q8TE23 839 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 ATOH1Q92858 354 aaPredicted RBP18.83■□□□□ 0.6
PTPN11-207ENST00000639857 SMARCD1Q96GM5 515 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 ZNF518BQ9C0D4 1074 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 NIF3L1Q9GZT8 377 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 MAN1B1Q9UKM7 699 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 PIAS3Q9Y6X2 628 aa18.83■□□□□ 0.6
PTPN11-207ENST00000639857 TRAV19A0A0A6YYK7 116 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms